Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4714 ATGTCGTCATCGTCATCGGTTGAATCACTTGTTCTTAAACTCCATGAGATATCAGCTGTCAAATTCGGAAACTTCAAGCTCAAATCTGGCATCTCCTCACCAATCTACATTGACTTACGTCTCATTATATCTTATCCTTCTCTCCTCCAGCAAATCTCTCAGACCCTAATTTCCTCTGTTTCTTCCGCTTCCTTTGAGCTTGTATGTGGTGTCCCTTACACCGCCTTACCCATTGCAACATGTGTCTCTCTTGCTCAGAACCTCCCTATGGTAATGCGTCGTAAGGAAGTCAAAGACTACGGCACTGCTAAAGCCATTGAAGGTGATTTCAAGTCTGGCCAAAGTTGCTTAATCATTGAGGATTTGGTTACCAGTGGAACTTCAGTTTTGGAAACAGCTGCACCTCTACGTTCTGTGGGGTTGAAGATCACTGATGCTGTTGTCTTGATCGATAGAGAGCAAGGTGGGCGAGAAAATTTGGAGGAGAATGGCATCAAGCTGCATGCAATTATTAAATTGACTGAAATGGTGAAAATTTTGAGGGATCATGGAAGACTTGATGACGAGATGGTTGGAGTCGTCACAAGATTCTTAGATGAGAATCGGAAGGTTGCAGCTGTGGCAAAGGTTGAGAAGCCAATTGCTAAGGTCAAGTCTTTGTCATTTGGGGAGAGGGCTAAGCTTTCCAAGAATCCAACAGGAAAGAGGTTGTTTGAGATAATGGCTAAGAAGGAGAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTCAAATTGCTGAGAAGGTTGGACCTGAGATATGCTTGCTGAAGACTCATGTGGATATTTTGCCAGATTTTACTCCTGATTTTGGCTCTAAGCTTCTCTCGATTGCAGAAAAACATAACTTCTTAATCTTTGAGGATCGTAAATTTGCTGACATTGGTAACACAGTGACCATGCAATATGAAGGAGGGATCTTTCACATATTGGATTGGGCTCACATAGTAAATGCTCACATTATCTCTGGTCCTGGAATCGTGGATGGACTAAAATTGAAGGGTTTGCCTCGTGGTAGGGGACTGTTGCTGCTTGCTGAAATGAGTTCAGCCGGCAACCTTGCCAAGGGAGATTATACCGCTGCTGCATTGAAAATTGCTGAGGAGCATTCCGACTTTGTAATTGGCTTCATCTCCGTTAATCCTGCATCATGGCCAGGGGCACCCATAAATCCTTCTTTCATTCAGGCAACTCCTGGAGTTCAAATGGTGACTGGTGGTGATGGATTAGGGCAACAATATAACACTCCACATTCTGTCGTTCATGATAGGGGAAGTGACATTATCATCGTGGGACGTGGCATTATCAAGGCAGCAAATCCTGCTGAGGCAGCTCATGAATACCGTCTACAAGGATGGAACGCATATTTGGCCAAATCTGCTTAA 1437 0.4398 MSSSSSVESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQTLISSVSSASFELVCGVPYTALPIATCVSLAQNLPMVMRRKEVKDYGTAKAIEGDFKSGQSCLIIEDLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKILRDHGRLDDEMVGVVTRFLDENRKVAAVAKVEKPIAKVKSLSFGERAKLSKNPTGKRLFEIMAKKESNLCLAADVGTAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHNFLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTAAALKIAEEHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDGLGQQYNTPHSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKSA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4714 478 CDD PRTases_typeI 65 172 IPR000836 -
Tpr3g4714 478 SUPERFAMILY PRTase-like 7 191 IPR029057 -
Tpr3g4714 478 CDD OMP_decarboxylase_like 248 465 - -
Tpr3g4714 478 Gene3D - 2 211 IPR029057 -
Tpr3g4714 478 Pfam Phosphoribosyl transferase domain 63 158 IPR000836 -
Tpr3g4714 478 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 303 316 IPR018089 GO:0004590|GO:0006207
Tpr3g4714 478 SUPERFAMILY Ribulose-phoshate binding barrel 220 474 IPR011060 -
Tpr3g4714 478 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 234 IPR023031 GO:0004588|GO:0006221
Tpr3g4714 478 TIGRFAM pyrE: orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Tpr3g4714 478 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 465 IPR001754 GO:0004590|GO:0006207
Tpr3g4714 478 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 7 477 - -
Tpr3g4714 478 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 248 466 IPR014732 GO:0004590|GO:0044205
Tpr3g4714 478 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 7 477 - -
Tpr3g4714 478 Gene3D Aldolase class I 216 477 IPR013785 -
Tpr3g4714 478 SMART OMPdecase_2 247 465 IPR001754 GO:0004590|GO:0006207
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4714 Tpr-Chr3 52071204 52075123 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4714 3 52071204 52075123 Tpr7g1660 7 18888338 18891880 PCT