Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4713 ATGGTCGGACATACAAGTATGGCTTGTAGTAAACCATTCTTCGATGATATGCGGAGCAGATCTGGGGTTGACCCTCCTCAAACTGAAGAGTCAACAGAAATTCCTGAACTCGTAAATGATCCTTTACAGACTGTTGTTAAACCTAATGGGACTGTTACGAGCAGTGTTCGTGAGCTTTTAGAGTGTCCTGTGTGCTTGAATGCTATGTACCCTCCAATTCACCAGTGCTCGAATGGTCACACTTTATGCTCTGATTGTAAACCAAGAGTCCATGACCGGTGCCCTACTTGTTGGCATGAACTCGGGAATATTAGATGTCTGGCATTGGAGAAGGTGGCTGCATCTTTAGAACTTCCTTGTAAATATCAAGGTTTCGGGTGCATAGGCATATACCCATATTACAGCAAGCTAAAACACGAGTCTCAATGTGTGTTTAGACCTTATAACTGTCCATATGCTGGTTCAGAATGTTCTGTTGTCGGTGATATACGTTACCTGGTGGCACACTTGAAAGATGATCATAAAGTGGACATGCATAGTGGTTGCACTTTTAATCATCGCTATGTCAAATCAAATCCACAAGAAGTTGAAAATGCCACGTGGATGCTAACGGTTTTTAGTTGCTTCGGACAGTATTTTTGTCTGCATTTTGAAGCATTTCAATTGGGAATGGCTCCTGTCTACATAGCATTTTTACGGTTCATGGGCGATGATAATGAGGCAAAGAACTATACCTACAGTCTTGAGGTAGGTGGAAATGGGAGGAAGATGACCTGGCAAGGCGTGCCTAGAAGCATTAGGGAAAGCCACCGCAAGGTTCGTGACAGTTTTGACGGTCTCATCATTCAAAGAAACATGGCTCTCTTCTTTTCTGGGGGTGACAGGAAGGAGTTGAAACTACGAGTTACCGGAAGGATTTGGAAAGAACAATGA 933 0.433 MVGHTSMACSKPFFDDMRSRSGVDPPQTEESTEIPELVNDPLQTVVKPNGTVTSSVRELLECPVCLNAMYPPIHQCSNGHTLCSDCKPRVHDRCPTCWHELGNIRCLALEKVAASLELPCKYQGFGCIGIYPYYSKLKHESQCVFRPYNCPYAGSECSVVGDIRYLVAHLKDDHKVDMHSGCTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYTYSLEVGGNGRKMTWQGVPRSIRESHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4713 310 SUPERFAMILY RING/U-box 52 100 - -
Tpr3g4713 310 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 169 303 IPR008974 GO:0005515
Tpr3g4713 310 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 13 310 - -
Tpr3g4713 310 SUPERFAMILY TRAF domain-like 115 307 - -
Tpr3g4713 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 168 IPR013083 -
Tpr3g4713 310 MobiDBLite consensus disorder prediction 1 33 - -
Tpr3g4713 310 ProSiteProfiles Zinc finger SIAH-type profile. 115 175 IPR013010 GO:0008270
Tpr3g4713 310 CDD Sina 176 304 - -
Tpr3g4713 310 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 13 310 - -
Tpr3g4713 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 113 IPR013083 -
Tpr3g4713 310 CDD RING-HC_SIAHs 60 97 - -
Tpr3g4713 310 Pfam Seven in absentia protein family 104 303 IPR018121 GO:0005737|GO:0006511|GO:0007275
Tpr3g4713 310 ProSiteProfiles Zinc finger RING-type profile. 62 97 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4713 Tpr-Chr3 52064964 52069364 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4713 3 52064964 52069364 Tpr7g1665 7 18931761 18936232 PCT