Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4527 ATGGACGATAATGGTATCACAAATAATGCAGTCAAGAACAAGTGGATAATGCCTCTATCAGTTTTCTTCAAAGATGCAAGCCTTGTATTCAAGATGGACTCCCTAGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTTGCTGTTGCTGCTGATCCAATTGCTTCTCTTATAGACACAGCATTCATAGGCCACTTGGGGCCGGTGGAACTTGCGGCTGCAGGAGTTTCGATTGCTGTGTTCAACCAAGCTTCAAGGATTACTATTTTCCCGCTGGTCAGTATTACAACTTCATTTGTAGCTGAAGAAGATACTATTGATAAAATTAATAGCAGAGCAGCAGAAAAGCAATTCAATGAAAGCATTAAGCCAAAGACCAATGAAGTAATGCCTGATGATCATATGCTTCGAGACATAGAAGCTGGTGCAACCAAACAGGATTGTACCTTGAAAAATGAGACAAAAAATGGAGATGATACAAATTCAAAGATGAGCAAGTCTTCTATTGTTACTGGCAATGGTAACAAGAGTGAGTCAAAACCTATAAGCAAGAAGAGGCACATTGCTTCAGCATCAACGGCATTACTTTTTGGCACAGTCCTTGGTCTTATTCAAGCTGCAACCCTTATATTTGCAGCTAAACCTCTATTAGGTGCAATGGGTTTGAAATATGATTCTCCTATGTTACCACCAGCTGTTAAGTACTTAAGATTGAGAGCCTTGGGTGCTCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTAGAGGGTTCAAAGACACAACAACTCCTTTATATGTCATTGTTTCCGGGTATACATTGAATGTTGCTATGGATCCACTACTTATATTTTACTTCAAATTGGGCATCAGAGGTGCAGCCATTTCACATGTGCTCTCTCAGTACATTATGGCAAGTTGCCTCTTGTTGATATTAATGAGAAAAGTGGATCTCCTACCTCCAAGCATGAAGGATTTGCAGATTTTCAGGTTTCTTAAAAATGGTGGTCTGTTGTTGGCCAGAGTTATAGCAGTGACATTCTGTGTGACCTTATCAGCCTCATTAGCAGCAAGGTTAGGTCCAATTCCAATGGCTGCATTCCAAACTTGCCTTCAGGTTTGGATGACATCATCCCTTCTTGCCGATGGTTTAGCCGTTGCTATACAGGCAATTCTAGCATGTTCATTTGCTGAGAAAGACTATGATAAAGTGACTACTGCAGCAACAAGGACACTGCAAATGAGTTTTGTTTTAGGAGTTGGACTCTCTCTTGTAGTTGGGGGTGGATTGTACTTTGGAGCTGGAGTATTTTCAAAAGACGTTGCTGTTATTCACCTAATCAGACTAGGCATCCCGGTATATTTTCCTAGCACAACACAATGGATTAGTTTGTTATGTTTTATATTAGGTGTAAAAGTTAGTTATACTAGTGAATTACATCTAATTTTTTGTGTTCTAGTTTTATCTAATTTCATTTTAACTCGCCAGTTTGTTGCTGCTACACAACCTATCAATTCATTAGCTTTTGTCTTTGATGGTGTGAACTATGGAGCATCTGATTTTGCTTATTCTGCATACTCCTTGGTTCTGGTCTCATTAGCCAGTGTTACTTCATTATTTATTCTCTACAAGAGTAAGGGTTTTATTGGGATCTGGATTGCTCTAACCATCTATATGAGTCTTCGTATGTTTGCTGGTGTATGGAGGATGGGAACGAGAACAGGACCCTGGCGTTTTCTCAGAGGCCGCTCATTGTCTTGA 1767 0.4029 MDDNGITNNAVKNKWIMPLSVFFKDASLVFKMDSLAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIAVFNQASRITIFPLVSITTSFVAEEDTIDKINSRAAEKQFNESIKPKTNEVMPDDHMLRDIEAGATKQDCTLKNETKNGDDTNSKMSKSSIVTGNGNKSESKPISKKRHIASASTALLFGTVLGLIQAATLIFAAKPLLGAMGLKYDSPMLPPAVKYLRLRALGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYTLNVAMDPLLIFYFKLGIRGAAISHVLSQYIMASCLLLILMRKVDLLPPSMKDLQIFRFLKNGGLLLARVIAVTFCVTLSASLAARLGPIPMAAFQTCLQVWMTSSLLADGLAVAIQAILACSFAEKDYDKVTTAATRTLQMSFVLGVGLSLVVGGGLYFGAGVFSKDVAVIHLIRLGIPVYFPSTTQWISLLCFILGVKVSYTSELHLIFCVLVLSNFILTRQFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVLVSLASVTSLFILYKSKGFIGIWIALTIYMSLRMFAGVWRMGTRTGPWRFLRGRSLS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4527 588 MobiDBLite consensus disorder prediction 162 179 - -
Tpr3g4527 588 TIGRFAM matE: MATE efflux family protein 45 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr3g4527 588 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 12 477 IPR044644 -
Tpr3g4527 588 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 472 586 IPR044644 -
Tpr3g4527 588 MobiDBLite consensus disorder prediction 147 185 - -
Tpr3g4527 588 CDD MATE_DinF_like 37 574 IPR044644 -
Tpr3g4527 588 Pfam MatE 343 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr3g4527 588 Pfam MatE 191 282 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr3g4527 588 PANTHER PROTEIN DETOXIFICATION 12 477 - -
Tpr3g4527 588 PANTHER PROTEIN DETOXIFICATION 472 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4527 Tpr-Chr3 50426370 50435932 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4527 3 50426370 50435932 Tpr7g1703 7 19466576 19474229 ECH
Tpr3g4527 3 50426370 50435932 Tpr3g4527 3 50426370 50435932 ECH