Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3460 ATGCAAGCGGTTGGAAGATTAGGAAGTTACATCAGTCAAGGCGTATACACCGTTTCCGGCCCTTTCCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAACAAGACGGTTCATTCAAATCATCACCATGGTATGTTCGATTTGGTAAATTCCAAGGCGTTTTAAAATCAAAAGAAAAAATTGTTCAAATCAATGTTAATGACATTGATGCTGATTTTCAAATGCATCTTGATAATAAAGGTGAAGCATTCTTTTTAAAAGAAATTGATGATGTTGAATCAATTTTAAATATTGATCCATCAGAATCTGGTGATGATGCTGATGATCAATCTTTTAGGTCTAAGAATAGTAATTTAGGTTCTGAAGATGGAGGAATTATAGGGAGAAGTAACTCTCGTCGTTCGCGGATACTTGGTCTTATGTTTGGGAGAAGGTCTTTGAGTGGTGAATTTGAAGATGCTATTGGGAATAAAGAACGCGCCGAGATTGCTGCTAATTTGTTGGATATTAAGTGGTCTACAAATGGTGATCATGCTGTTGTTGTGGAGAATGAAGATGGTTCTTTTGGTGTTGTTGCACAGCATGAAAAGAAATTTAATGGAGGAGAGGTTTCTGGCCGTAACAAGGTTTCTGTGGTTGAGAGTGTAGAAAAGAGTTCTAGAGTGAACATGGTTAGGTGTTTGAGTGAACAAACTCATGAGGTTATGAACCTTTCTCATGGCGAAAGTGGAGAGGTTCAAGTCATGCATTCACTCCCGTCTGAGGCTCAGCAAAGGGACTCTTCTGATTCTGAAGCTAGTATGTACGATGTGGAGGATGTTGAAAATAACTATTTGGATAGAGGACATTGTTCAAGTGACAATGTTGGGTCCTATAGTGTTACCAACGCTTCCAGTTACTACAGCCAGGATGAGCAAGGATCATGGGAGAATAACACGAAGGATAGCACGGTATCAACTCCAAAATACTCTATTGGTGATTGTTTACCTAGTGAAACATCAAGGAGACCATCGTCCTCAAGTTCAGATGAAGATAATTTCCTTTTTAGTGATCTTGATGAAAATGCAATCAATGATCAATTTGAGAGATCATCAACCTCTGAATATATAGATAAAGAAGATAATCTTTCTTATGAGAATGGCACTAAACTCTCAAGATTGACATCCTGTCCCATAGATATCCCTAGAAATAAGGATGCTGGGGGGAAAGTTGGGCAGCACAGAGGATCCTTGCCAAATACTCCTTCTGGGGGTCGCAGGAGGCGCAAACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCGACATTTCCTGGCAGAGATGGCATGAAATCCTTAAAATTCGATGAGTGCACAGAAAAGCAGCTACCGAATGAGCAGGCAGGTTCCAAAGATTACCGAGATTCTGATGAATTCAAAGATACAGCTCTGAATCACCCTCCTGGAGGTACGTCAACAACCGGCTCTTCACAAGGTGGAAATTGGAGAATTTGGCCTTTCCCCTCCTTGAGCAGAACAGTATCTAGAGAATCTTTGCCACCTATTCCAAATGATGCCAAAATTACTAGTAATGGCAATTCTCCAGAGAATAAGATTTCCACAGATGTGAACAAAAATGATACTAAACCCCCTAAACCCAATCAAACGAAAAAGAAGGTCAGAGAAACAACTCCAACTTCGGAACAGATAGCATCGTTAAATCTGAAGGAAGGGAGGAACATCGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAAACAGCAGGTTGATGCTCAAATATATCTGTGGCAATGGAATGCTCGGATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCACATTTATTCTCTGCTGTCAAGGAGAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTTAATCTTAAACAGGATGGCAAAGTTTTACCAGAGGGCCCTGTTGTTATTTCCCCCGATGGACTTTTTCCCTCTCTATACCGTGAAGTTATCAGGAGGGTTCCTCATGAATTCAAAATTGCATGCTTAGAGACTATCAAGGCTCTTTTTCCTGCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGACGAAATCAGTTACCTTAAAGTTGGAATCCCTTTAGGAAAAATCTTCATTATAAATCCCAAGGGAGAGATAGTTGTGAACCGAAGTCTTGACACAAAATCATACACTTCTATGCATGCACTCGTAAATGGAATGTTCCCCCCGACGAGCTCTTCTGAGCAGGAGGATTTTAATTCGTGGAATTTCTGGAAGCTACCTCCTTCTGCAATTGATATTTGA 2418 0.4082 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNDIDADFQMHLDNKGEAFFLKEIDDVESILNIDPSESGDDADDQSFRSKNSNLGSEDGGIIGRSNSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNGDHAVVVENEDGSFGVVAQHEKKFNGGEVSGRNKVSVVESVEKSSRVNMVRCLSEQTHEVMNLSHGESGEVQVMHSLPSEAQQRDSSDSEASMYDVEDVENNYLDRGHCSSDNVGSYSVTNASSYYSQDEQGSWENNTKDSTVSTPKYSIGDCLPSETSRRPSSSSSDEDNFLFSDLDENAINDQFERSSTSEYIDKEDNLSYENGTKLSRLTSCPIDIPRNKDAGGKVGQHRGSLPNTPSGGRRRRKHVRYPLSQSLDSTFPGRDGMKSLKFDECTEKQLPNEQAGSKDYRDSDEFKDTALNHPPGGTSTTGSSQGGNWRIWPFPSLSRTVSRESLPPIPNDAKITSNGNSPENKISTDVNKNDTKPPKPNQTKKKVRETTPTSEQIASLNLKEGRNIVTFTFSTAMLGKQQVDAQIYLWQWNARIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQDGKVLPEGPVVISPDGLFPSLYREVIRRVPHEFKIACLETIKALFPADCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPKGEIVVNRSLDTKSYTSMHALVNGMFPPTSSSEQEDFNSWNFWKLPPSAIDI* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3460 805 PANTHER GH19076P 1 804 - -
Tpr3g3460 805 SMART lns2 604 760 IPR031315 -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 399 470 - -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 103 128 - -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 515 545 - -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 515 561 - -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 445 470 - -
Tpr3g3460 805 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Tpr3g3460 805 MobiDBLite consensus disorder prediction 304 347 - -
Tpr3g3460 805 SUPERFAMILY HAD-like 597 748 IPR036412 -
Tpr3g3460 805 Pfam LNS2 (Lipin/Ned1/Smp2) 558 780 IPR013209 -
Tpr3g3460 805 PANTHER LIPIN 1 804 IPR026058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3460 Tpr-Chr3 38156116 38164226 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3460 3 38156116 38164226 Tpr3g3460 3 38156116 38164226 ECH
Tpr1g3694 1 41052680 41058963 Tpr3g3460 3 38156116 38164226 PCT