Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3457 ATGTCTGGTCGGAATGAACATGTTCCCCTTTCGGTTCTATTGAAACGTGAATTGGCGAATGAGAAAATGGACAAATCTGATATGGTTGTTGTGTATAGCCAAGCTAGTGAGAATAAGAAAGGAGAGGATTTTACATTGTTGAAGAATGAATGTCAAAGAGTTGTGGCTGATGGGGTCTCTACATATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTAAGTGCCATTCCTACAGATCTCAACAGAGATGAGTGGATAAAAGCGTTGCCAAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCACAATCATCAGGAACAACTGTAACCCTTGTGATTCTAGAAGGATGGGTTATAACAGTTGCCTCAGTTGGTGATTCCCGGTGCATACTTGAACCTTCTGAAGGTGGGCTTCATTACTTGTCAGCAGATCATCGACTAGACACTAATGAAGAGGAGAGGGTGCGCATCACTTCTTGTGGGGGTGAAGTTGGTCGGTTAAATACAGGCGGAGGTGCCGAGGTTGGTCCACTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCTCGATCCATCGGTGATATGGATGTTGGCGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCCACTTCTGGAGGAAGGCTTGTCATTAGTAGTGATGGGGTCTGGGATGCTCTAACTGCAGAAATGGTCCTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCATGCAAAGGGACTTAGAGATGACACAACCTGCATTGTTGTCGATATTTTACCCCAGGAGAAGCCACCTACTTCTGTACCATCACAAAAGAGACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGCAAAAAGTCCTCTGAGCCATCTTCATATATTGTAAGAGAATACGTTGAGCCCGATATGGTACGGGAACTATTTGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTTGAAACAAAATATCCACTTTGCAACATGTTCAAGATGTTCGTGTGTGCGGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAGGATGCCCCTAACCAAGGGAAACCACGCCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCAAGAGAAGAAACAAGCCATGGAAGGGAGACGAACATCAGGTGTGGGTGGCCAAGAGACGAAACAAGCCAAGGAGGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGACGAAACAAGCCATGGAAGGGAGACAAACATCAGGTGTGGGTTGCCAAGAGACAAAACAAGCCAAGGAAGGGAGACAAACATCAGGTGTGGGTGGCCAAGATATGAAACAAGCCATGAAAGGGAGACAAACATCAGGTGTGAGTGGCCAAGAGACAAAACAAGCCAAGGAAGGGAGACAAACATTAGGTGTGGGTGGCCAAGAGACGAAACAAGCCAAGGAGGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGACGAAACAAGCCATGGAAGGGAGACGAACATCAGGTGTGGGTGGCCAAGAGACGAAACAAGCCAAGGAGGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGACGAAACAAGCCATGGAAGGGAGACGAACATCAGGTGTGGGTTGCCAAGAGACAAAACAAGCCAAGGAAGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGATGAAACAAGCCATGGAAGGGAGACAAACATCGGGTGTGGGTTGCCAAGAGACAAAACAAGCGAAGGAAGAGAGACAAACATCAGGCGTGGGTTGCCAAGAGACGAAACAAGCCATGGAAGGGAGACAAACATCAAACGTAGGTTGCCAAGAGACAAAACAAGCAAAGGAAGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGATAAAACTAGCTAAGGAAGGGAGACAAACATCAGGTGTGGGTGGCCAAGAAATGAAACAAGCCAAGGAAGGGAGACAAACATCAGGTGTGGGTTGCCAAGAGACAAAACAAGCCAAGGAAGGGAAACAAACATCAGGTGGGGGTTGCCAAGAGACAAAACAAGCCAAGGAAGGGAGACAAACATCAGGCGTGGGTTGCCAAGAGACGAAACAAGCCAAGGAAGGGAAACAAACATCAGGTGGGGGTTGCCAAGAGACAAAACAAGCCAAGGATGGGAGACAAACATCAGGCGTGGGTTGCCAAGAGACGAAACAAGCCACGGAAGGGAGACGAACATCAGGCGTGGGTTGCCAAGAGACAAAACAAGCCAAGGAAGGGAGACAAACATCAGGCGTGGGTGGCCAAGAGACAAAACAAGCCAAGGAAGAGAGACAAACATCAGGCGTGGGTGGCCAAGAGATGACACAAGCCAAGGAAGGGAGACAAACATCAGGTGTGGGTGGCCAAGAGACAAAACAAACCAAGGAAGGGAGACAAACATCAGGTGTAGGTTGCCGAGAGACGAAACAAGCCATGGAAGGGAGACAAACATCAGGTGTGGGTTGCCAAGAGACGAAACAAGCCAAGGAAGGAAGACAAACATCAGATAGACATAGCGGTCGAAGTGACTAA 2661 0.4776 MSGRNEHVPLSVLLKRELANEKMDKSDMVVVYSQASENKKGEDFTLLKNECQRVVADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPTDLNRDEWIKALPRALVAGFVKTDKDFQQKAQSSGTTVTLVILEGWVITVASVGDSRCILEPSEGGLHYLSADHRLDTNEEERVRITSCGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTSGGRLVISSDGVWDALTAEMVLDCCRGMSAEAAAPHIVKESLHAKGLRDDTTCIVVDILPQEKPPTSVPSQKRPVKGMLKAIFRKKSSEPSSYIVREYVEPDMVRELFEEGSAMLSERFETKYPLCNMFKMFVCAVCQVEIKPGEGISVHEDAPNQGKPRPWDGPFLCSSCQEKKQAMEGRRTSGVGGQETKQAKEGRQTSGVGGQETKQAMEGRQTSGVGCQETKQAKEGRQTSGVGGQDMKQAMKGRQTSGVSGQETKQAKEGRQTLGVGGQETKQAKEGRQTSGVGGQETKQAMEGRRTSGVGGQETKQAKEGRQTSGVGGQETKQAMEGRRTSGVGCQETKQAKEGRQTSGVGGQEMKQAMEGRQTSGVGCQETKQAKEERQTSGVGCQETKQAMEGRQTSNVGCQETKQAKEGRQTSGVGGQEIKLAKEGRQTSGVGGQEMKQAKEGRQTSGVGCQETKQAKEGKQTSGGGCQETKQAKEGRQTSGVGCQETKQAKEGKQTSGGGCQETKQAKDGRQTSGVGCQETKQATEGRRTSGVGCQETKQAKEGRQTSGVGGQETKQAKEERQTSGVGGQEMTQAKEGRQTSGVGGQETKQTKEGRQTSGVGCRETKQAMEGRQTSGVGCQETKQAKEGRQTSDRHSGRSD* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3457 886 SMART PP2C_4 23 291 IPR001932 -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 540 567 - -
Tpr3g3457 886 Gene3D - 21 300 IPR036457 -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 620 656 - -
Tpr3g3457 886 PANTHER ALPHABET, ISOFORM E-RELATED 5 422 - -
Tpr3g3457 886 SUPERFAMILY PP2C-like 30 293 IPR036457 -
Tpr3g3457 886 CDD PP2Cc 31 293 IPR001932 -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 872 886 - -
Tpr3g3457 886 Pfam Protein phosphatase 2C 53 280 IPR001932 -
Tpr3g3457 886 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 5 422 - -
Tpr3g3457 886 SMART PP2C_SIG_2 47 293 IPR001932 -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 408 886 - -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 506 533 - -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 421 499 - -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 807 871 - -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 676 799 - -
Tpr3g3457 886 MobiDBLite consensus disorder prediction 574 612 - -
Tpr3g3457 886 ProSiteProfiles PPM-type phosphatase domain profile. 32 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3457 Tpr-Chr3 38125399 38132120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3457 1 420 PP2C-type Phosphatase Gene Family AT1G47380 73.697 0.0 686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3457 3 38125399 38132120 Tpr3g3457 3 38125399 38132120 ECH
Tpr1g3696 1 41070770 41076592 Tpr3g3457 3 38125399 38132120 PCT