Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3444 ATGAACAAGACCGTGAGAACAAGGTTGAATCCTAGGAAAGGTTCAGTGTCACATGAAAATATAATTAAATTTGCTATAAAGTCAGAACTCATTAAAAGTTCTTCTCCTCACAACTCACAAGCCATGGCTTCAGTTTCAACAAACAAAGATCTTAGAGTTCCTCAAAACATGCAAAAAGGCATAGGAAATGCAGTTAAAGATGGAAAAATTTCCAGCAAAGACAGAAAAATGGCTTTGCAACAAGATGTGGATAGATTGAAGAATAAGCTTAGGCATGAAGAGAACATTCACAAGGCATTGGAGAGAGCTTTGAATAGGCCTTTGGGGGCTCTTCCTCGTCTTCCTCCTTATCTCCCTCCCTATACACTTGGACTTGTGGCTGAAGTGGCGGTACTTGAAGAAGAAATAAGAAGGCTTGAAGAGAAAGTTTTATATTTTAGGCAGAATTTGCATCAAGAAGCAGTTTACATGTCATCCTCCAAGATGAAACTGGAGCATTCAGAACCAACACATGTGAACAATGCAAACACAAATGATAGTACAAAATTGAGCAATGTTGTAGCATCTGCAACTAGGCCTAAAACAACATTTCCTGAGGATAGACAAGGAAAAGAGATTCAATCATTTACTCATTCTTACAAGCTCAACAAGCAGTCCATATGCAAAGGCCAAATGGCAAAAATTCCAATTGACAATAAATCACTACAGAAATGTTCTGAACCTCCCAAGAAACAGCAGGAACTTCTTCGAAACAATCGTCTACAAGAAATTCCACAAGGAGATGAAAGTCCAAATACAATCTCTGAAAATATTGTCAAGTGTTTAACTAGCATTCTCTTGAGAATGAGTACACCACCTTTAAGGCCTCTAAAATCTAAAAACTGTATTGAAGGAACAGAGTTTTTGGATCCATATGGTATCTTGGAATTTGGAAATAGAGACATTGGTCCATACAAGCAATTAAGTGCAAGTATTGAAGCTCATTCTTTCAATCCAACACAAACTGCTAAGTCTTTGTTTTTACTGCATCGGTTGAAGGTTCTTTTGAGAAAACTAGCATTTGTTAACATTGAGAATCTCAAGCATCAAGAGAAGCTTGCATTCTGGATCAACATATATAACTCTTGTATGATGAATGCATTCATAGAAAATGGGATACCAAAGAGTCCTGAAATGGTTGTTGCATTGATGCAGAAGGCAACAATAAATGTAGATGGACAGTTGTTAAATGCTACAACCATAGAACACTGCATTTTAAGGCTTCCATATCACTGGAAATATCTAAATTCCAAACAGATCACATTATTAAAGGAAGTGAAAAATCATGAAATGACAGTAAGAAGCATTTATGGACTTGAATTGTCAGAACCTCTAGTGACATTTGCTCTCTCTAGTGGAACTTGGTCATCTCCTGCTGTTAGAGTTTACACAGCATCCAATGTTGAGAAGGAACTTGAAGTAGCCAAAAGAGAATACTTACAAGCTGCAGTAGGAATTTCAACATCAAAGTTTTTTATTCCAAAGATGTTGGATTGGTATTTACTTGACTTTGCAAAAGACTTAGAGTCATTGATGGATTGGATATGCCTTCAATTACCAAGTGAACAAATGAAAGAAACAATTAAATTTCTTGAGAAAAGAAAAACTCAACCCCTCTCACAATTTGTAAAAATTATGCCATATGAGTTCAGATTTAGATACTTGGTATAA 1710 0.3614 MNKTVRTRLNPRKGSVSHENIIKFAIKSELIKSSSPHNSQAMASVSTNKDLRVPQNMQKGIGNAVKDGKISSKDRKMALQQDVDRLKNKLRHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVAVLEEEIRRLEEKVLYFRQNLHQEAVYMSSSKMKLEHSEPTHVNNANTNDSTKLSNVVASATRPKTTFPEDRQGKEIQSFTHSYKLNKQSICKGQMAKIPIDNKSLQKCSEPPKKQQELLRNNRLQEIPQGDESPNTISENIVKCLTSILLRMSTPPLRPLKSKNCIEGTEFLDPYGILEFGNRDIGPYKQLSASIEAHSFNPTQTAKSLFLLHRLKVLLRKLAFVNIENLKHQEKLAFWINIYNSCMMNAFIENGIPKSPEMVVALMQKATINVDGQLLNATTIEHCILRLPYHWKYLNSKQITLLKEVKNHEMTVRSIYGLELSEPLVTFALSSGTWSSPAVRVYTASNVEKELEVAKREYLQAAVGISTSKFFIPKMLDWYLLDFAKDLESLMDWICLQLPSEQMKETIKFLEKRKTQPLSQFVKIMPYEFRFRYLV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3444 569 PANTHER EXPRESSED PROTEIN 22 569 - -
Tpr3g3444 569 Coils Coil 122 149 - -
Tpr3g3444 569 Pfam Leucine-zipper of ternary complex factor MIP1 72 153 IPR025757 -
Tpr3g3444 569 PANTHER TRANSCRIPTION FACTOR 22 569 - -
Tpr3g3444 569 Coils Coil 69 103 - -
Tpr3g3444 569 Pfam Protein of unknown function, DUF547 358 493 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3444 Tpr-Chr3 37983680 37988125 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3444 3 37983680 37988125 Tpr3g3444 3 37983680 37988125 ECH
Tpr1g3710 1 41214366 41218248 Tpr3g3444 3 37983680 37988125 PCT