Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3291 ATGGGTTGCGTGCTTGGAACGCCGGCCGGTGACGGAGATCAACGCCGTCACCGGAAAGATCAGCGTAACGGTAACGGTTCTTCTGAAGTAGTTAATAATGTCGTTACGGTTCGTGAGAAGCATAAAAATCGGCACACCGGTGATTTTCCGGGGACTCTTCCGGCGATAGAGCGTCGGAAACCTATACTGGATCCACTTGCGTTGAATCAACAAGGTTGGCCGTCTTGGTTAATGGCCGTCGCCGGTGAAGCTATCGGAGATTGGACTCCTCGTCGTGCCAACACGTTTGAAAAACTTTCTAAGATTGGGCAAGGTACTTATAGTAATGTGTATAAAGCTAGAGATTTAGTTACAGGGAAGATAGTGGCTTTAAAAAAAGTGAGATTTGATAATTTGGAGCCAGAAAGTGTGAAGTTTATGGCAAGAGAGATACTTGTTTTGAGAAAACTTGATCATCCAAATGTTTTAAAGCTTGAAGGATTGGTTACTTCTAGAATGTCATGTAGTCTTTATTTGGTATTTGAGTATATGGTACATGATCTTGCAGGGCTTTCAGCTAGCCAAGGTGTTAAGTTTACTGAACCTCAGGTCAAATGTTTTATGAAGCAATTACTTTCCGGTCTTGAGCATTGCCACAGTCGAGGAGTATTGCACCGTGATATCAAGGGTTCCAATCTGCTAATTGACAATGAAGGAATCCTAAAAATTGCAGATTTTGGACTGGCAACTTTCTATAATCCTAATAAAAAACAGTGCATGACAAGCAGAGTTGTGACACTTTGGTATCGACCCCCTGAGCTTCTTCTTGGGGCTACATTTTATGGTGTAGGAATTGACCTTTGGAGCGCGGGTTGCATTTTGGCAGAGCTACTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGCTCTCCTGCTGAGGAATATTGGAGGAAGCATAAATTGCCAAATGCTACAATCTTTAAGCCACAGCAGCCATATAAACGTTGTATCTCAGAAACATTCAAGGATTTTCCTCCATCTTCACTTCCTCTAATTGAAACTCTTCTTGCAATAGATCCTGACCGTCGTGGCACTGCCTCAGCTGCTCTAAATCATGAATTTTTTACCACCGAGCCCTATGCTAGTGAACCGTCGAGTTTGCCAAAGTATCCTCCGAGCAAAGAATTGGACGTAAAAATGAGAGATGAAGAAGCTAGAAGGCAAAAAGCACTAAATGGAAAATCTAATGGAGTTGATGGTACCAAAAGAGCCAGAGCACGTGATCGTAGTCGAGCTATTCCGGCGCCAGAAGCTAATGCAGAGAACCAAACAAACTTAGATAGGTGGAGAGTAGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCACAAGATGAATCAAATAAAGGACCTGCTTCATTTGGTGCACCAGACACATCCTTTAACTCAGGAATATTCAATATAAAACCATCTGATCCTACTAGAAGTCAAGATGGTACAGGAACTCACAAAGGAACAAAAACTAAAAAAGAAGAATCTCAGATGCCATCATCATCGTCGTCATGGAAATTTATGCGACCATTCAAGCCGTCAACAATTGGACATTCAATGGATTTATTATTTAGGAGCAAGTAA 1689 0.4233 MGCVLGTPAGDGDQRRHRKDQRNGNGSSEVVNNVVTVREKHKNRHTGDFPGTLPAIERRKPILDPLALNQQGWPSWLMAVAGEAIGDWTPRRANTFEKLSKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRKLDHPNVLKLEGLVTSRMSCSLYLVFEYMVHDLAGLSASQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYNPNKKQCMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPPSSLPLIETLLAIDPDRRGTASAALNHEFFTTEPYASEPSSLPKYPPSKELDVKMRDEEARRQKALNGKSNGVDGTKRARARDRSRAIPAPEANAENQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPQDESNKGPASFGAPDTSFNSGIFNIKPSDPTRSQDGTGTHKGTKTKKEESQMPSSSSSWKFMRPFKPSTIGHSMDLLFRSK* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3291 562 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Tpr3g3291 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Tpr3g3291 562 Gene3D Transferase(Phosphotransferase) domain 1 179 420 - -
Tpr3g3291 562 SUPERFAMILY Protein kinase-like (PK-like) 90 385 IPR011009 -
Tpr3g3291 562 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 62 533 - -
Tpr3g3291 562 MobiDBLite consensus disorder prediction 413 453 - -
Tpr3g3291 562 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g3291 562 ProSiteProfiles Protein kinase domain profile. 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3291 562 Gene3D Phosphorylase Kinase; domain 1 83 178 - -
Tpr3g3291 562 CDD STKc_CDK9_like 96 380 - -
Tpr3g3291 562 MobiDBLite consensus disorder prediction 530 544 - -
Tpr3g3291 562 MobiDBLite consensus disorder prediction 496 519 - -
Tpr3g3291 562 SMART serkin_6 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3291 562 MobiDBLite consensus disorder prediction 496 545 - -
Tpr3g3291 562 Pfam Protein kinase domain 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3291 562 PANTHER CELL DIVISION PROTEIN KINASE 62 533 - -
Tpr3g3291 562 MobiDBLite consensus disorder prediction 425 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3291 Tpr-Chr3 36247764 36252579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3291 88 414 Core Cell Cycle Gene Families AT5G10270 51.714 2.46e-114 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr3g3291 Pkinase 5.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3291 K08819 - gmx:100807756 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3291 3 36247764 36252579 Tpr3g3291 3 36247764 36252579 ECH