Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2066 ATGATTTTCTCTTCTATTCAAGGTTATGTAGATCCACCTAATTGGCACAACCAGCAACCAAATCAACATCAACAAAATGGAAGTGATAACATTCAACTTCTTCCACCTTTACCACCTCAAGTGGGAGGTAGTACTGGTGCTTCTGGTGGTGGTACTATGGGCTCGATCAGGCCAAGCTCTATGGCTGAACGAGCTCGTTCAGCAAAACTACCACCACCAGAGCAACAACTTAAGTGTCCACGATGCGATTCAACCAACACTAAATTTTGCTACTTCAACAACTACAGCCTCACTCAACCTCGTCACTTCTGCAAAGCATGTAGGCGTTATTGGACAAGAGGAGGTGCACTTAGAAATGTTCCGGTTGGTGGAGGGTGTCGTAGAAACAACAAGAAGAACAAAAGAAGCCGTTCGAAATCTCCTAATTCAACAAACTCTCATGAAAAACAAACTTCTTCATCAAGTGCAATTCCTCCTCATCATGAACTAATTGGTCATCAGTTACCACAAACAATTACCAACTTACCCTTCATGGCCTCGATGCAGAATCATCTCAGTCGTTATGTTGTTGGTAACGTTAACATGGGTCTCGGTTTACGCGAGATCCAAGAACAACAACAACAACAACAAACAGATCAAATGGGATTTCAAATTGGTGTTGGTAATGGTAACGGTAACTCATTAGTTACTGTTTCTGCTGCTGTTGCCGGAGGAGGTGTTGGAGTTGATCAGTGGCGTAATTTACAACAATTTCCTTTCTTGAATACTTTTGAATCAAATTCTGGTGGAAATAATTCATTTCCTTTTCAAGGAGAAAGTATTGAAGCAACATCATCTGGATTTGTTGGAGATATAGCTTCAAATCCTAGGGTTGTTAATCAAGAACAACCACCACTTAAAATGGAAGAAAATAGAAGTTTAAATTTGTCAAGAACTTCTCTTGGTGTCTCTGAACATAATAACCAGCAGCAATTTTATTCATGGAATGATTTATCAGGTTCTTCAACTACTCATCTCCTATAA 1023 0.3988 MIFSSIQGYVDPPNWHNQQPNQHQQNGSDNIQLLPPLPPQVGGSTGASGGGTMGSIRPSSMAERARSAKLPPPEQQLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNNKKNKRSRSKSPNSTNSHEKQTSSSSAIPPHHELIGHQLPQTITNLPFMASMQNHLSRYVVGNVNMGLGLREIQEQQQQQQTDQMGFQIGVGNGNGNSLVTVSAAVAGGGVGVDQWRNLQQFPFLNTFESNSGGNNSFPFQGESIEATSSGFVGDIASNPRVVNQEQPPLKMEENRSLNLSRTSLGVSEHNNQQQFYSWNDLSGSSTTHLL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2066 340 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Tpr3g2066 340 MobiDBLite consensus disorder prediction 139 156 - -
Tpr3g2066 340 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 336 IPR045174 GO:0003700|GO:0006355
Tpr3g2066 340 MobiDBLite consensus disorder prediction 122 156 - -
Tpr3g2066 340 Pfam Dof domain, zinc finger 75 131 IPR003851 GO:0003677|GO:0006355
Tpr3g2066 340 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Tpr3g2066 340 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 4 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2066 Tpr-Chr3 18999140 19001283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2066 19 277 C2C2-Dof Transcription Factor Family AT3G55370 41.007 1.32e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr3g2066 zf-Dof 7.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2066 - - gmx:100801154 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2066 3 18999140 19001283 Tpr3g2066 3 18999140 19001283 ECH
Tpr7g4477 7 53493799 53495616 Tpr3g2066 3 18999140 19001283 PCT