Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1487 ATGGCGCCGAGCATTCAACTAACTTCCGCCGGCGCCGGTAACGACTCCGACTCCGGCGACCTTGAAGATGTCCGCCTTCTAGATTCCTACGATAAACGCGATATTGAAGACGGAACCAAACGGATTCAGGTTAGAATCTCCGGCATGACATGCGCCGCTTGTTCAAACTCCGTTGAAGCCGCTCTTAAGTCCGTCGACGGCGTAATTGAAGCCTCCGTCGCTTTACTTCAGAATAAAGCCGACGTCGTTTTCAATAAAAACCTCGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCCGTTGGACCGAAACCGGTTGGTGATAGTACGGTGGTTGGACAGTTTACGATTGGTGGTATGACGTGTGCGGCGTGTGTGAATTCTGTTGAGGGAATTTTGAAGAATATCGCCGGAGTGAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTTTGATCCAAAAGTTATTAGTAAAGAAGAAATTGTTAGTGCAATTGAAGATGCTGGTTTTGAAGCTTCTTTTGTGCAGAGTACTAGTCAAGATGAGATTGTTTTAGGTGTTGTTGGTGTTGTTGATGTTCAGGTTTTGGAGAGTATGTTAAGTGGTTTTAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAACTTAATGTTGTTTTTGATCCTCAAGTTCTAAGTTCTAGATCAGTGTTTGATGGGATTTGTGCAGTTAGTAATGGCAAGTTTAAGGTGCATGTTAGAAGTCCTTATGCCAGAATGGCTTCCAAAGATGGATCAGAGAGTGAAACCATGTTTCGACTTTTTACTTCCAGCTTGTTTCTTAGTATTCCTCTCTTCTTCATGGGGGTAATTTGTCCTCATATTCCATTTATATACTCTTTATTGCTTTGGAGATGCGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTAGTGAGTGTCATCCAATTTGTGATTGGAAAGCGCTTCTACATAGCAGCTATCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACGGCATCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAATATTTGGAATGTCTTGCCAAAGGAAAGACATCTGATGCCATTAAGAAGTTAGTAGAACTGACTCCTGCAACAGCTCTGTTGGTTGTTAAAGACAAAGATGGTAAATCTATTGAAGAAAGAGAAATAGATTCCCTGCTTATTCAACCTAGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCCGCTGATGGTATTGTTAGCTGGGGCTCAAGTTATGTGAATGAGAGTATGGTGACTGGTGAATCTATACCTGTTTTGAAGGAGATCAATGCATCTGTTATTGGAGGTACAATCAATTTGCATGGCGTCCTTCATATTCAAGCCACCAAAGTAGGATCCGATACAGTTTTGAGTCAGATAATTAATTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTATGTTGGTATACTGCTGGGGCTCTTGGAGCTTACCCGGATGAATGGCTGCCGGAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACTGGGGTTGGGGCAAACAACGGTGTGCTGATTAAAGGAGGAGAATCCTTAGAAAGGGCTCAGATGGTGAAGTATGTTATATTTGATAAAACCGGAACTCTAACTCAGGGTAAAGCCACTGTCACTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGGGTCCTCTCTTACCAATGGTTCCCAGAATGATGTCAATGAGTTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCGTTATAGATGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGAGGAAAGTGGCATAAATATTTCTACTGAAGTGGAAAGTTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCATGTGATGGTATATTGATTGGAGTCATGGGCGTTGCAGACTCACTTAAGCGAGAAGCCTTTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGCGCTGTTGCCAAGGAGGTTGGTATTCGAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGTATAGTTGCAATGGTGGGTGATGGTATAAACGACTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGAACAGATATTGCAATAGAAGCCGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTGATCACAGCTATTGATCTTTCTAAGAAGACCTTTTCTCGTATTCGATTGAATTATGTATTTGCGATGGCCTACAATATTATCGCCGTACCAGTTGCTGCAGGGGTTTTATTTCCTTCACTGGGGATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCGTCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCCATACTTACTACAATACTTCATGAAATAGTTGTAAATTAA 2976 0.4244 MAPSIQLTSAGAGNDSDSGDLEDVRLLDSYDKRDIEDGTKRIQVRISGMTCAACSNSVEAALKSVDGVIEASVALLQNKADVVFNKNLVKDEDIKNAIEDAGFEAEILHEPVSVGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILKNIAGVKKAVVALATSLGEVEFDPKVISKEEIVSAIEDAGFEASFVQSTSQDEIVLGVVGVVDVQVLESMLSGFKGVRQFRFDPLLSELNVVFDPQVLSSRSVFDGICAVSNGKFKVHVRSPYARMASKDGSESETMFRLFTSSLFLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFVIGKRFYIAAIRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGKSIEEREIDSLLIQPSDTLKVLPGTKIPADGIVSWGSSYVNESMVTGESIPVLKEINASVIGGTINLHGVLHIQATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVTVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDGSSLTNGSQNDVNELKSGWLYDASDFSAIPGRGVQCVIDGQRVLVGNRKLLEESGINISTEVESFVVELEESAKTGILVACDGILIGVMGVADSLKREAFVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIRDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPILTTILHEIVVN* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1487 991 Gene3D - 412 534 - -
Tpr3g1487 991 PANTHER ATP7, ISOFORM B 4 983 - -
Tpr3g1487 991 ProSitePatterns Heavy-metal-associated domain. 46 76 IPR017969 GO:0046872
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 480 494 - -
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 644 658 - -
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 789 800 - -
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 811 821 - -
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Tpr3g1487 991 PRINTS P-type cation-transporting ATPase superfamily signature 887 899 - -
Tpr3g1487 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 646 652 IPR018303 -
Tpr3g1487 991 Gene3D - 39 110 - -
Tpr3g1487 991 Gene3D - 126 191 - -
Tpr3g1487 991 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 358 973 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tpr3g1487 991 SUPERFAMILY Calcium ATPase, transduction domain A 444 530 IPR008250 -
Tpr3g1487 991 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Tpr3g1487 991 SFLD Haloacid Dehalogenase 626 915 - -
Tpr3g1487 991 TIGRFAM TIGR00003: copper ion binding protein 42 105 IPR006122 GO:0005507
Tpr3g1487 991 TIGRFAM TIGR00003: copper ion binding protein 127 189 IPR006122 GO:0005507
Tpr3g1487 991 Gene3D - 651 743 IPR023299 GO:0000166
Tpr3g1487 991 Gene3D - 744 795 IPR023299 GO:0000166
Tpr3g1487 991 CDD HMA 43 106 IPR006121 GO:0046872
Tpr3g1487 991 SUPERFAMILY HMA, heavy metal-associated domain 121 194 IPR036163 GO:0046872
Tpr3g1487 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 734 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1487 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 397 664 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1487 991 SUPERFAMILY HAD-like 643 970 IPR036412 -
Tpr3g1487 991 PANTHER HEAVY METAL P-TYPE ATPASE 4 983 - -
Tpr3g1487 991 Pfam E1-E2 ATPase 425 623 - -
Tpr3g1487 991 SFLD p-type atpase 626 915 IPR044492 -
Tpr3g1487 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 376 953 IPR023298 -
Tpr3g1487 991 Gene3D - 611 921 IPR023214 -
Tpr3g1487 991 ProSiteProfiles Heavy-metal-associated domain profile. 41 107 IPR006121 GO:0046872
Tpr3g1487 991 CDD P-type_ATPase_Cu-like 285 960 - -
Tpr3g1487 991 SUPERFAMILY HMA, heavy metal-associated domain 36 109 IPR036163 GO:0046872
Tpr3g1487 991 Pfam Heavy-metal-associated domain 44 104 IPR006121 GO:0046872
Tpr3g1487 991 Pfam Heavy-metal-associated domain 128 188 IPR006121 GO:0046872
Tpr3g1487 991 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Tpr3g1487 991 PRINTS H+-transporting ATPase (proton pump) signature 836 852 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1487 991 PRINTS H+-transporting ATPase (proton pump) signature 864 880 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1487 991 PRINTS H+-transporting ATPase (proton pump) signature 895 920 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1487 991 CDD HMA 127 190 IPR006121 GO:0046872
Tpr3g1487 991 Pfam haloacid dehalogenase-like hydrolase 640 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1487 Tpr-Chr3 13277494 13283568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1487 1 985 Primary Pumps ATPases AT5G44790 72.338 0.0 1448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1487 K17686 - gmx:100778219 1622.06