Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1422 ATGGAGAACAATCCTCTTCACCTTTTACCTCACCTCACTATAACACTCCTTCTTATGATGATCCTAACCGTTTTGTTTCCTATGAGTACTTCTGAATCACTTTCTTCTATCAAAACTGATGCAAAGGCTCTTCTTACATTCAAAAACTTGATTCAGAAAGATCCAAATGGAGTTTTATCAGGTTGGAATCTAAAAACAAATCCATGCACTTGGTATGGTATATCTTGCACACATGGAAGAGTAACTGGTCTTGATATTACTGGAACCAATGATCTTTCTGATACTATTTCTCTTGATCCTTTATATTCCTTAAACATGTTATCTGTTCTCAAACTTTCTTTCAATTCATTTGCTATAAATTCTACTTCTTTGATTCAGTTACCATATAGTTTAACACAACTTGATCTATCTTTTGGTAACCTCACAGGTCCTATTCCTGAAAATTTCTTGTCAAAATGTCCTAATCTTGTTGTTGTGAATCTTTCTTACAACAATTTGACAGGTTCTATACCTGAAAATTTCATGCAAAGTACTAATAAACTTCAGTCTCTTGATCTTTCTTCCAACAATTTGACAGGTTCAATTTTTGGTTTGAAAATTGAGTACTGTAAATCATTGTTGCAACTTGATATATCAGGAAACCATTTATCAGACTCAATTCCAATTTCTTTGTCAAATTGCACCAGTCTTAAGAGTTTGAATTTAGCAAACAATCTTATTTCTGGTGGAATTCCGAAGAATTTCGGTCAGTTGAATAAACTACAGACTTTGGATCTTTCACACAATCAAATTACTGGTTGGATCCCTTCTGAGTTGGGAAATTTATGTGGTTCTCTTTTAGAACTTAAACTTTTTTTCAACAATCTTACAGGTTCAATTCCATCCGGTTTCTCTTCTTGCACATTGCTGCAACTTGTTGATATATCAAACAATAATATGACAGGTGAAGTACCTGAGTCGGTGCTTCGGAACCTTGGATCATTGGAGGAACTTAGGTTGGGAAATAACGCTATCTCTATGAAATTTCCATCTTCAATATCATCATGCAAAAAATTGAGGATTGTTGATTTTAGCTCAAATAAAATTTATGGATCTATTCCTAGAGATTTGTGTCCAGGTGCAGCCTCACTTGAGGAGCTGAGAATGCCTGATAATCTCATAGCAGGTGAGATTCCAGCTGAATTGTCAAAGTGTTCACAGTTGAAGACTATTGATTTTAGTTTGAACTATTTGAATGGTTCAATTCCTGATGAGCTAGGAGAACTTGAGAATCTTGAGCAGTTGATAGCATGGTTCAATGGTTTGGAAGGAAAAATTCCACCAAAGTTGGGACAATGTAAGAATCTTAAGGATCTTATACTGAATAATAATCACCTTAGTGGTGGAATTCCAATTGAGTTGTTCAATTGCAGCAATCTTGAATGGATATCTCTGACAAGCAATGAACTCACCGGAGAAATACCACGAGAGTTCGGCCTTTTGACAAGGTTGGCAGTTCTTCAGCTTGGTAACAACAGGTTTACTGGTGAGATACCATCAGAGCTAGCAAATTGCAACAGTTTGGTGTGGTTGGATTTGAACAGCAACAAGCTCACAGGAGAGATCCCTCCTAGACTTGGCAGGCAGCAAGGAGCGAAATCGTTGTTTGGCATTCTTTCAGGAAACACTTTGGTGTTTGTAAGAAATGTCGGAAACTCGTGTAAAGGAGTTGGTGGTTTGCTAGAGTTCTCAGGAATCCGATCCGAACGGCTCTCACAGGTACCGACATTGAGGTCTTGTGATTTCACAAGACTGTATTCTGGTCCTGTACTCAGCTTGTTTACAAAATATCAGACACTAGAGTATCTTGATCTCTCCTACAACCAGCTTCGTGGAAAAATACCGGATGAATTCGGAGATATGGTGGCCTTACAGGTACTTGAATTGTCTCACAATCAACTATCTGGTGAAATCCCTTCAACCCTTGGACAGCTCAAAAATTTGGGAGTGTTTGATGCATCACATAATAGACTTCAGGGTCAAATCCCAGACTCATTCTCAAACCTATCATTTTTGGTGCAAATAGACTTATCTTACAATGAGTTAACAGGTCAAATTCCATCCAGGGGACAACTAAGTACGCTTCCGGCCACTCAGTATGAAAACAATCCAGGCCTTTGCGGCGTTCCTTTGCCCGAGTGCAAAAGTGGCAACAGCCAATCCTCATCAAGTCCAAGTGATGATTTTAGCAGAGGAGGCCAAAGAAGATCAGTTGCATCATGGGCTAACAACATTGTCATGGGAGTTCTCATTTCTGTGGCTTCTGTTTGCATTTTGATAGTGTGGGCGATCGCAATGCGTGTAAGGAGGAAAGAGGCTGAGGAAGTCAAGATGCTTAATAGGTTGCAAGCATGCCATGCTGCTACAACATGGAAAATTGACAAAGAGAAAGAGCCATTAAGCATTAATGTTGCAACATTTCAGAGGCAGTTAAGGAAACTAAAATTCTCACAGTTGATTGAAGCAACCAATGGATTCTCAGCAGAAAGCCTAATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAGGCTACACTCAAAGACGGATCATCTGTCGCGATAAAGAAGCTCATTCGATTGAGTTGCCAAGGCGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAACACAGAAATCTTGTCCCTCTATTAGGATACTGCAAAGTAGGTGAAGAGAGACTCCTTGTTTATGAATACATGGAATACGGAAGCCTAGAAGAGATGCTCCATGGAAGAATAAAGACACGCGATCGCAGAATTTTAACATGGGAAGAAAGGAAGAAAATTGCAAGAGGTGCTGCAAAAGGACTTTGTTTTCTGCATCATAATTGCATCCCTCACATCATACACAGAGACATGAAATCAAGCAATGTGCTACTTGATCATGAAATGGAGTCAAGGGTCTCAGATTTCGGAATGGCAAGACTAATAAGTGCACTTGATACACACCTCAGTGTAAGCACACTAGCAGGAACGCCCGGATATGTTCCACCAGAGTACTATCAAAGTTTTAGGTGCACCGCAAAGGGAGATGTTTATTCATTTGGCGTTGTAATGTTGGAACTTGTTAGTGGCAAACGTCCTACCGATAAAGAGGATTTTGGTGACACAAACTTGGTCGGATGGGCTAAGATTAAGGTGCGCGAAGGAAAACAAATGGAAGTAATTGATGCTGATTTGCTTTTGGAGAGTCAAGGAGGAACAAATGAAGCAGAAGTAAAAGAAGTTAAAGAAATGATAAGATATTTGGAGGTTACTTTGCGGTGTGTCGATGATATGCCTTCTAAAAGGCCAAGCATGTTGCAGGTAGTGGCCATGTTGAGAGAGCTTATGCCTGGATCAAATGATGGAAGTAGCAACAGTGCTTAA 3414 0.3943 MENNPLHLLPHLTITLLLMMILTVLFPMSTSESLSSIKTDAKALLTFKNLIQKDPNGVLSGWNLKTNPCTWYGISCTHGRVTGLDITGTNDLSDTISLDPLYSLNMLSVLKLSFNSFAINSTSLIQLPYSLTQLDLSFGNLTGPIPENFLSKCPNLVVVNLSYNNLTGSIPENFMQSTNKLQSLDLSSNNLTGSIFGLKIEYCKSLLQLDISGNHLSDSIPISLSNCTSLKSLNLANNLISGGIPKNFGQLNKLQTLDLSHNQITGWIPSELGNLCGSLLELKLFFNNLTGSIPSGFSSCTLLQLVDISNNNMTGEVPESVLRNLGSLEELRLGNNAISMKFPSSISSCKKLRIVDFSSNKIYGSIPRDLCPGAASLEELRMPDNLIAGEIPAELSKCSQLKTIDFSLNYLNGSIPDELGELENLEQLIAWFNGLEGKIPPKLGQCKNLKDLILNNNHLSGGIPIELFNCSNLEWISLTSNELTGEIPREFGLLTRLAVLQLGNNRFTGEIPSELANCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRSERLSQVPTLRSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMVALQVLELSHNQLSGEIPSTLGQLKNLGVFDASHNRLQGQIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQYENNPGLCGVPLPECKSGNSQSSSSPSDDFSRGGQRRSVASWANNIVMGVLISVASVCILIVWAIAMRVRRKEAEEVKMLNRLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELVSGKRPTDKEDFGDTNLVGWAKIKVREGKQMEVIDADLLLESQGGTNEAEVKEVKEMIRYLEVTLRCVDDMPSKRPSMLQVVAMLRELMPGSNDGSSNSA* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1422 1137 SMART LRR_typ_2 325 349 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 251 275 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 422 446 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 494 518 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 634 658 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 520 542 IPR003591 -
Tpr3g1422 1137 SMART LRR_typ_2 447 470 IPR003591 -
Tpr3g1422 1137 Pfam Brassinosteroid receptor island domain 549 607 IPR045381 -
Tpr3g1422 1137 ProSitePatterns Protein kinases ATP-binding region signature. 845 868 IPR017441 GO:0005524
Tpr3g1422 1137 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Tpr3g1422 1137 Pfam Leucine rich repeat 606 647 IPR001611 GO:0005515
Tpr3g1422 1137 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Tpr3g1422 1137 ProSiteProfiles Protein kinase domain profile. 839 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1422 1137 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 25 1126 - -
Tpr3g1422 1137 Pfam BspA type Leucine rich repeat region (6 copies) 295 386 IPR026906 -
Tpr3g1422 1137 PRINTS Leucine-rich repeat signature 181 194 - -
Tpr3g1422 1137 PRINTS Leucine-rich repeat signature 251 264 - -
Tpr3g1422 1137 SUPERFAMILY Protein kinase-like (PK-like) 820 1122 IPR011009 -
Tpr3g1422 1137 SUPERFAMILY L domain-like 375 726 - -
Tpr3g1422 1137 SMART serkin_6 839 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1422 1137 Gene3D Ribonuclease Inhibitor 29 104 IPR032675 -
Tpr3g1422 1137 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Tpr3g1422 1137 SUPERFAMILY RNI-like 201 440 - -
Tpr3g1422 1137 ProSiteProfiles Leucine-rich repeat profile. 253 276 IPR001611 GO:0005515
Tpr3g1422 1137 SUPERFAMILY L domain-like 39 275 - -
Tpr3g1422 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672|GO:0006468
Tpr3g1422 1137 CDD STKc_IRAK 845 1125 - -
Tpr3g1422 1137 Gene3D Transferase(Phosphotransferase) domain 1 915 1135 - -
Tpr3g1422 1137 Gene3D - 552 608 - -
Tpr3g1422 1137 Gene3D Phosphorylase Kinase; domain 1 798 914 - -
Tpr3g1422 1137 Gene3D Ribonuclease Inhibitor 106 727 IPR032675 -
Tpr3g1422 1137 Pfam Protein tyrosine and serine/threonine kinase 842 1122 IPR001245 GO:0004672|GO:0006468
Tpr3g1422 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 25 1126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1422 Tpr-Chr3 12622713 12626666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1422 44 1134 Receptor kinase-like Gene Family AT1G55610 47.703 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr3g1422 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1422 3 12622713 12626666 Tpr3g1422 3 12622713 12626666 ECH