Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0349 ATGGCGACGCCATTGGATTGCGTAGGAGGAGGTTTCGCTTTTCTCTCCAATTCAACAAACAAAGTCGATTCATCTTCTTCTCTCAATGCTTCTTTAAAGTGCTCCAAACTCGACTCGCCAATTTTGATCTTCTTGTTCTTTCATAAAGCGATTCGGAATGAACTTGATACTTTACACCGATTAGCCATGGCATTCGCCACCGGTAATCGCTCCGATATTCAGCCACTCTTCGACCGTTACCATTTTCTCAGCTCTATTTATAGACATCACTCCAATGCTGAAGATGAGGTGATTTTTCCAGCTCTAGACAGACGTGTGAAGAATGTAGCACAGACATATTCTCTTGAGCACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTGTTAAATTCTTCCATCAAGAATGATGAGAGTTTTCCAAGAGAATTAGCATCTTGCACTGGAGCTTTACAGACATCTGTTAGTCAACACTTGGCAAAGGAAGAGGAACAGGTATTTCCTCTGCTTATTGAGAAGTTCTCTCTTGAGGAACAAGCATCCTTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTGAATATGATGGCAGAATTTCTTCCCTGGCTTTCAACATCTATATCAGCTGATGAATCTCAGGATTTACGAGATTTCTTAATCAAAATTGTGCCAGAGGAAAGGCTTCTTCAAAAGGTTGTTTTCACCTGGATGGAAGGGAGAAGTAGTGTTAGTACAATTCAAAGTAGTGCAATTCATTCTCAAGTTCAATGTTATTCTAGCCCATTAACCCATCAGGTTGGAAGAGTAAATTGTGTATGCGAGTCCACAACAACTGGAAAAAGGAAACATTCTGGATCTATGCTAGATGTTTCTGATGCCACCAGGACACATCCTATAGATGAGATATTGCTCTGGCATAATGCAATAAAAAAAGAGTTAAGTGAGATAGCAGTGGAGACCAGAAGAATACAACACTCTGGAGATTTTACCGACATATCAGCCTTTAATGACAGACTGCAATTCATTGCTGACGTTTGCATATTTCATAGTATTGCTGAGGACAAGGTTATTTTTCCAGCGGTAGATGGAGAATTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTCGGTGTTTGATTGAAAGTATTCTAAGCGAAGGAGCATCATCTAATTCAGAAGTTGAATTTTATTCCAAGTTATGCTCACATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCAAGAATGCACTTTAGCTTTAGAAAACAATGTGAACTTCTGTATCAAAGCTTATGCATGATGCCTCTGAAATTGATTGAGAGAGTCCTACCATGGTTGGTAGGATCTTTAACTGAAGAAGAAGCAAAGATGTTTCTGAGAAACATGCAATTTGCAGCTCCAGCAACAGATTCTGCTCTCGTCACACTCTTCAGTGGCTGGGCATGCAAGGCTCGTAATGAAGGCCTGTGTTTGTCTTCGGGCACATCAGTTTGCTGCCCTGCTCAAAGACTTTCTGATATTGAAGAAAATATTGATCAGCCATCCTGTGTTTGTATCACAGCATCATCTGACAGACATTGCTCAGTAATATTTGAGTCAGATGGCAACAAAAGACCAGTCAAGCGAAACACTTTGAAGTTGAACAATGGAGATGTACCTAAAACTTCAGAGACCGAAAGTACCCAGAAACAGTGCTGTAGTCCTCGGTCCTGTTGTGTGCCAGGTTTAGGAGTAAACAGTAACAATTTGGGGCTTGGTTCAATTTCTACAGCCAAGTCTCTACGCTCCTTGTCTTTCAGCTCTTCTGCTCCATATCTTAATTCCAGTCTTTTCATATGGGAAACAGAGAACAGCTCATGTGACGTTGGCTCTGCAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCTATACGTAAAGACTTAGAGTATCTAGATGTTGAGTCTGGAAAGCTGAGTGATAGTGACGAGACAATTATTCGGCAATTTAGTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCAGCATTAGAATCCAAAGAGGCCCTTCACAATGTGAGCCATTCATACATGTTGGACCATAAGCAGGAAGAACAATTGTTTGAAGATATTTCTTGCGTTCTTTCTGAGTTTTCTGTCCTTCATGAAGCCTTGCAGTTGACCCATATGGCAGAGGATTTGAGTGATAGTAATTTTGGAACCTCTGATACCAATGACAGTGATGATGTCAAGAAGTATAACGAACTTGCAACAAAGCTTCAGGGGATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAGCGTGAACTGTGGCCATTGTTTGGAAAACATTTCACTGTGGAAGAACAAGATAAGATAGTAGGCCGGATAATTGGAACTACTGGTGCTGAAGTTCTCCAGTCAATGTTACCGTGGGTAACTTCTGCACTTACTCAGGATGAACAGAATAAAATGATGGATACATGGAAGCAGGCAACTAAGAATACTATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAGAGTCCAGTATCTATAGCACCGACAGAAACATCACATCGTAGCACTTCTCATAAAGGATCTGAGTATCAGGAATGCTTGAACCTCAATGATCAAATGTTCAAGCCAGGTTGGAAAGACATTTTCCGGATGAATCAGAATGAACTTGAGTCTGAGATCCGGAAGGTTTATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCTTATCTTGTGCAAAATCTTTTGACAAGTCGTTGGATAGCTGCCCAGCAGAAATCACCTAAAGCTTCATCTGAAGGATCATCTAATGGTGTCGAAATAGAAGGACACTCACCATCATTTCGGGACCCAGGGAAACTTGTATTTGGGTGTGAGCACTATAAGAGAAATTGCAAGCTTCGAGCTGCATGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACATTGTGAGCGATCACTCAATGGATAGAAAAGCAACATCGGAAATGATGTGTATGCGCTGCCTGAATATACAGCCAATTGGGCCTATATGCATGACACCTTCATGTAATGCACTTTCAATGGCAAAGTACTATTGCAGTATATGCAAATTTTTTGATGATGAAAGGAATGTATACCATTGCCCATTTTGTAATTTATGCCGTGTTGGGCGAGGGCTTGGGATTGATTATTTTCATTGCATGAAATGCAATTGCTGCCTGGGGATTAAATCGTCATCTCATAAATGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGCTGTGACGACTTATTCACATCAAGTGCTACAGTCAGAGCTCTGCCTTGTGGTCACTACATGCATTCTGCTTGTTTTCAGGCATACACTAGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTCGATGCCTTATTGGCTGCAGAGGAGCTCCCTGAAGAGTATAGGAACCGTCATCAGGATATACTTTGCAATGACTGTGATCGAAAGGGCACCTCACGCTTCCATTGGCTGTATCACAAATGTGGATCTTGTGGCTCTTACAATACTCGGCTGATCAAGCGTGAGACACATTCCAGCAGCTCTTAG 3711 0.4093 MATPLDCVGGGFAFLSNSTNKVDSSSSLNASLKCSKLDSPILIFLFFHKAIRNELDTLHRLAMAFATGNRSDIQPLFDRYHFLSSIYRHHSNAEDEVIFPALDRRVKNVAQTYSLEHKGESNLFDHLFELLNSSIKNDESFPRELASCTGALQTSVSQHLAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISADESQDLRDFLIKIVPEERLLQKVVFTWMEGRSSVSTIQSSAIHSQVQCYSSPLTHQVGRVNCVCESTTTGKRKHSGSMLDVSDATRTHPIDEILLWHNAIKKELSEIAVETRRIQHSGDFTDISAFNDRLQFIADVCIFHSIAEDKVIFPAVDGEFSFFQEHAEEESQFNDFRCLIESILSEGASSNSEVEFYSKLCSHADHIMETIQRHFHNEEVQVLPLARMHFSFRKQCELLYQSLCMMPLKLIERVLPWLVGSLTEEEAKMFLRNMQFAAPATDSALVTLFSGWACKARNEGLCLSSGTSVCCPAQRLSDIEENIDQPSCVCITASSDRHCSVIFESDGNKRPVKRNTLKLNNGDVPKTSETESTQKQCCSPRSCCVPGLGVNSNNLGLGSISTAKSLRSLSFSSSAPYLNSSLFIWETENSSCDVGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDSDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSEFSVLHEALQLTHMAEDLSDSNFGTSDTNDSDDVKKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPVSIAPTETSHRSTSHKGSEYQECLNLNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKSPKASSEGSSNGVEIEGHSPSFRDPGKLVFGCEHYKRNCKLRAACCGKLFTCRFCHDIVSDHSMDRKATSEMMCMRCLNIQPIGPICMTPSCNALSMAKYYCSICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSSSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTSSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRNRHQDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRLIKRETHSSSS* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0349 1236 SMART ring_2 1121 1162 IPR001841 -
Tpr3g0349 1236 ProSiteProfiles Zinc finger CHY-type profile. 985 1054 IPR008913 GO:0008270
Tpr3g0349 1236 CDD RING-H2_Pirh2 1120 1163 - -
Tpr3g0349 1236 SUPERFAMILY Zinc hairpin stack 1058 1114 IPR037275 -
Tpr3g0349 1236 CDD Hr-like 43 169 - -
Tpr3g0349 1236 Gene3D nmb1532 protein domain like 641 882 - -
Tpr3g0349 1236 SUPERFAMILY RING/U-box 1118 1173 - -
Tpr3g0349 1236 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 27 1235 - -
Tpr3g0349 1236 SUPERFAMILY CHY zinc finger-like 988 1048 IPR037274 GO:0008270
Tpr3g0349 1236 Pfam Hemerythrin HHE cation binding domain 645 808 IPR012312 -
Tpr3g0349 1236 Pfam Hemerythrin HHE cation binding domain 45 171 IPR012312 -
Tpr3g0349 1236 Pfam Hemerythrin HHE cation binding domain 297 431 IPR012312 -
Tpr3g0349 1236 CDD Hr-like 647 807 - -
Tpr3g0349 1236 Gene3D nmb1532 protein domain like 37 189 - -
Tpr3g0349 1236 Gene3D nmb1532 protein domain like 299 447 - -
Tpr3g0349 1236 Pfam CHY zinc finger 992 1067 IPR008913 GO:0008270
Tpr3g0349 1236 ProSiteProfiles Zinc finger RING-type profile. 1121 1163 IPR001841 -
Tpr3g0349 1236 Coils Coil 1235 1236 - -
Tpr3g0349 1236 MobiDBLite consensus disorder prediction 960 979 - -
Tpr3g0349 1236 Pfam Zinc-ribbon 1168 1225 IPR039512 -
Tpr3g0349 1236 CDD Hr-like 300 429 - -
Tpr3g0349 1236 Pfam Ring finger domain 1120 1162 IPR001841 -
Tpr3g0349 1236 MobiDBLite consensus disorder prediction 960 976 - -
Tpr3g0349 1236 Gene3D - 1191 1233 - -
Tpr3g0349 1236 ProSiteProfiles Zinc finger CTCHY-type profile. 1057 1120 IPR017921 -
Tpr3g0349 1236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1117 1165 IPR013083 -
Tpr3g0349 1236 PANTHER CHY ZINC FINGER PROTEIN 27 1235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0349 Tpr-Chr3 3781829 3790552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0349 1 1231 C2H2 Transcription Factor Family AT3G18290 67.357 0.0 1689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0349 3 3781829 3790552 Tpr3g0349 3 3781829 3790552 ECH