Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0343 ATGGTGCTCTTCAATGTTTCTCGCATTCAAACTACTCCTTTCGATGGACAAAAGCCTGGAACCTCTGGTCTTCGTAAAAAGGTGAAAGTATTTGTGCAACCTCATTACCTTGAGAACTTTGTTCAGGCATCATTCAATGCACTAACCGAAGCAAAAGTTAGAGGTGCAACACTAGTTGTATCTGGTGATGGTCGTTATTATTCGGAGCAAGCAATTCAGATTATAACTAAAATGGCAGCAGCAAATGGAGTAAGGCGTATTTGGGTTGGTCTAAATGGGTTGCTTTCAACTCCTGCAGTATCTGCTGTTATACGTGAAAGAGTTGGGGTTGACGGATCCAAGGCAACAGGAGCATTTATACTGACAGCAAGTCACAACCCTGGTGGTCCTAATGAGGATTTTGGGATAAAATATAACATGGAAAATGGTGGACCTGCACCAGAGGGAATTACTAACAAAATATATGAATACACAACAACAATCAAGGAGTACTTGATTGCTCCAGATTTGCCAAATGTGGATATCAGCACAGTAGGTGTTTCAAACTTCACAGGGCCTGAAGGACCATTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTATATAAAGTTGATGAAGTCAATTTTTGACTTTGAATCCATCAGGAAACTGCTGTCATCTCCTAAATTCACATTCTGTTACGATGCATTACATGGAGTTGCTGGAGCTTATGCAAAGCGTATTTTTGTGGATGAGCTTGGGGCACAAGAAAGCTCTTTGCTGAACTGTGTACCAAAGGAAGACTTTGGAGGGGGACACCCAGACCCTAATTTGACATATGCAAAAGAGTTGGTTGCTCGTATGGGATTGGGAAAATCAGAACCTCAAGGTGAGCCCCCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGACCGCAACATGATACTTGGTAAAAGGTTTTTTGTCACTCCTTCGGATTCTGTGGCCATTATTGCTGCAAATGCTGTTCAAGCAATACCATACTTTTCTGCTGGCCTAAAGGGAGTTGCCAGGAGCATGCCAACCTCTGCTGCCTTGGATGTTGTAGCAAAACATCTGAATTTGAAGTTTTTTGAGGTTCCTACGGGTTGGAAGTTCTTTGGTAATTTAATGGATGCTGGATTGTGTTCAGTTTGCGGTGAAGAAAGTTTTGGGACTGGTTCGGATCACATTCGTGAGAAGGATGGAATCTGGGCAGTTTTGGCCTGGCTATCTATACTTGCATATAAAAATAAAGATAATCAAGACAAGCTCGTAACAGTTGAAGACATAGTTCGCCAGCATTGGGCTACCTATGGGCGCCACTATTATACTCGATATGACTACGAAAATGTGGATGCAGTTGCAGCAAAGGAACTGATGGCACATTTGGTCAAACTGCAGTCCTCACTTTCAGAAGTCAATAAGATTGTGAAGGGAGCAAGCTCAGATGTTTCAAATGTTGTCCACGGTGATGAATTTGAATACAAGGATTCGGTGGATGGTTCCGTTTCATCGCATCAGGGCATCCGATATTTGTTTGAGGATGGATCACGATTGATCTTCCGCCTCTCTGGAACTGGATCAGAAGGCGCAACTATTCGACTATACATTGAGCAATATGAGAAGGATCCATCAAAGATTGGGAGACTTTCACATGAAGCACTTGCTCCTCTTGTGGCGGCTGCATTGAAACTTTCAAAGATGGAGGAATTTACCGGCCGATCTGCTCCCACAGTCATTACATAA 1746 0.429 MVLFNVSRIQTTPFDGQKPGTSGLRKKVKVFVQPHYLENFVQASFNALTEAKVRGATLVVSGDGRYYSEQAIQIITKMAAANGVRRIWVGLNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPNEDFGIKYNMENGGPAPEGITNKIYEYTTTIKEYLIAPDLPNVDISTVGVSNFTGPEGPFDVEVFDSASDYIKLMKSIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVDELGAQESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLGKSEPQGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVQAIPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNQDKLVTVEDIVRQHWATYGRHYYTRYDYENVDAVAAKELMAHLVKLQSSLSEVNKIVKGASSDVSNVVHGDEFEYKDSVDGSVSSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSHEALAPLVAAALKLSKMEEFTGRSAPTVIT* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0343 581 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 17 164 IPR005844 GO:0005975|GO:0016868
Tpr3g0343 581 PANTHER BNAA09G30060D PROTEIN 3 115 - -
Tpr3g0343 581 PANTHER BNAA09G30060D PROTEIN 114 581 - -
Tpr3g0343 581 SUPERFAMILY Phosphoglucomutase, first 3 domains 301 445 IPR016055 GO:0005975|GO:0016868
Tpr3g0343 581 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 200 309 IPR005845 GO:0005975
Tpr3g0343 581 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 118 127 IPR016066 GO:0000287
Tpr3g0343 581 Gene3D - 5 204 - -
Tpr3g0343 581 Gene3D - 421 581 - -
Tpr3g0343 581 SUPERFAMILY Phosphoglucomutase, first 3 domains 3 229 IPR016055 GO:0005975|GO:0016868
Tpr3g0343 581 Gene3D - 314 412 - -
Tpr3g0343 581 SUPERFAMILY Phosphoglucomutase, C-terminal domain 440 581 IPR036900 GO:0016868|GO:0071704
Tpr3g0343 581 SUPERFAMILY Phosphoglucomutase, first 3 domains 199 314 IPR016055 GO:0005975|GO:0016868
Tpr3g0343 581 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 317 438 IPR005846 GO:0005975|GO:0016868
Tpr3g0343 581 Gene3D - 205 313 - -
Tpr3g0343 581 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 114 581 IPR045244 GO:0004614|GO:0005975
Tpr3g0343 581 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 3 115 IPR045244 GO:0004614|GO:0005975
Tpr3g0343 581 CDD PGM1 9 581 - -
Tpr3g0343 581 PRINTS Phosphoglucomutase/phosphomannomutase family signature 117 131 IPR005841 GO:0005975|GO:0016868
Tpr3g0343 581 PRINTS Phosphoglucomutase/phosphomannomutase family signature 222 241 IPR005841 GO:0005975|GO:0016868
Tpr3g0343 581 PRINTS Phosphoglucomutase/phosphomannomutase family signature 258 271 IPR005841 GO:0005975|GO:0016868
Tpr3g0343 581 PRINTS Phosphoglucomutase/phosphomannomutase family signature 293 308 IPR005841 GO:0005975|GO:0016868
Tpr3g0343 581 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 551 IPR005843 GO:0016868|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0343 Tpr-Chr3 3705102 3712176 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0343 3 3705102 3712176 Tpr3g0343 3 3705102 3712176 ECH