Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3902 ATGAACGACGCCGATGTCTCCAAGCAAATCCAGCAGATGGTCAGATTCATCCGCCAAGAAGCCGAAGAGAAAGCCAACGAGATCTCTGTTTCCGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTGGTTGAGGCTGACAAGAAGAAGATCCGTCAAGAGTATGAGCGCAAGGAGAAGCAAGTTGATGTTAGGAAGAAGATTGAGTACTCTATGCAGTTGAATGCTTCACGGTTAAAAGTTCTGCAAGCTCAAGATGATGTGGTTAATAAAATGAAAGAGGATGCAGCCAAGGAACTGTTGAGTGTGAGTCGTGATCATCATGTGTACAAAAACCTTCTAAAAGATCTCGTTATTCAGAGTTTGCTAAGGCTGAAAGAACCTTCTGTCCTATTGAGGTGTCGGAAAGAGGACCTGCACTTGGTAGAGAATGTGTTGGATTCAGCTGCTAAGGAGTATGCTGAAAAGGCAAATGTTCATGTACCTGAGATTGTTGTTGATAAGGATGTCTATCTTCCACCTGCCCCCAGCCATCACAATCCCCATGATCTCCACTGCTCTGGAGGTGTGGTATTGGCTTCTCATGATGGCAAGATTGTGTTTGAAAATACACTTGATGCGCGTTTGGATGTAGTGTTCCGGAACAAACTCCCAGAGATCCGCAGGCAGCTCTTTGCACAAGTTGCTGTTTGA 693 0.4502 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEKQVDVRKKIEYSMQLNASRLKVLQAQDDVVNKMKEDAAKELLSVSRDHHVYKNLLKDLVIQSLLRLKEPSVLLRCRKEDLHLVENVLDSAAKEYAEKANVHVPEIVVDKDVYLPPAPSHHNPHDLHCSGGVVLASHDGKIVFENTLDARLDVVFRNKLPEIRRQLFAQVAV* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3902 230 Coils Coil 41 61 - -
Tpr2g3902 230 Gene3D - 1 62 - -
Tpr2g3902 230 PANTHER BNAC03G72900D PROTEIN 1 221 - -
Tpr2g3902 230 Gene3D - 92 229 IPR038495 -
Tpr2g3902 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr2g3902 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr2g3902 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 221 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr2g3902 230 SUPERFAMILY V-type ATPase subunit E-like 87 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3902 Tpr-Chr2 41747115 41751863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3902 1 229 Primary Pumps ATPases(2) AT4G11150 77.729 2.59e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3902 K02150 - egr:104443962 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3902 2 41747115 41751863 Tpr2g3902 2 41747115 41751863 ECH