Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2223 ATGGCCACTGTTGCAACCAGAGGAATTGGGGTCACAAACCTCCATCATCCCCACAACCAAAAATCTCTCTTTCTTGGCCAAAGACTTAGATTCAAACCTTCAAACAATGAATCATCACCACCATCATTCACTGCAAGATTCACCCCAAAAGCTTTTCATGGTGGTGAATGGCTTCATTCAGTTCATAACCTTTTTGTTGGTGTTGGTGTTGGACTTCCATGCACAGTGATGGAGTGTGGAGACATGATTTATAGAAGCACTCTTCCTAGACCTAGTGGTTTGACAGTTACTATCCCTGGTGTTGTTTTGGCTTTTGGTGCTCTTTCTTATCTTTGGGCTACACCTGGTGTTGCTCCTGGTTTTTTTGATATGTTTGTTCTTGCTTTTGTTGAAAGATTGTTCAGACCTACTTTTAGAAAGGATGATTTTGTTCTAGGGAAGAAGCTCGGAGAGGGATCATTTGGAGTTGTTTATAGAGTCTCACTAGCTAACAAGCCTTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCGACTGAATATGGTGCCGTAGAAATTTGGATGAATGAACGAGTACGAAGAGCTTGTGCAAACAGCTGTGCAGATTTTGTTTATGGTTTTCTTGAGAGGTCTACAAAGAAGACTCCTGAATATTGGCTTATATGGCGGTTCGAAGGGGATGCCACCTTAGCTGATCTATTACAGAGTAGAGATTTTCCGTACAATGTCGAAACATTGCTTCTTGGTGAGGTACAAGATTTGCCAAAGGGATTGGAAAGAGAAAATAGAATTATTCAAACAATCATAAGGCAACTTTTGTTTGCATTAGACGGTCTTCACTCAACTGGTATTGTGCATCGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGTCTCGCACATTCAAAATAATTGATCTTGGAGCTGCTACAGACCTGCGAGTTGGGATCAACTACATCCCTAAGGAGTTTCTTTTGGATCCAAGATATGCTGCGCCAGAGCAGTACATTATGAGCACACAAACTCCATCTGCACCCTCAGCTCCTGTTGCAACTGCACTCTCTCCAGTCTTATGGCAGCTGAATCTTCCTGACAGATTTGATATCTACAGTACTGGTCTGATATTTCTCCAAATGGCATTTCCTAATTTACGCACTGATAATAGCCTCATACAATTCAACCGTCAATTAAAGCGGTGTGACTATGACTTGGTTGCATGGAGGAAAACTGTAGAGCCTCGAAGCAGTGCTGAACTTAGGAGGGGCTTTGAGCTCTTGGATTTGGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTTCGATACAAAGCAAGGCAAAGGCTGAGTGCAAAAGCAGCATTAGCTCATCCTTACTTTGACAAAGAAGGTTTGTTGGCATTATCGATTATGCAAAATGTGAGACTTAAGTTCTTTCGAGCAACTCAGCAGGATTATAGCGAAGCTGCCAAGTGGATTATTCAGCTTATGGCTAAATCAGGAACAGAAAAGGATGGTGGATTCACTGAAGCTCAGCTTCAGGAACTTAGAGAAATTTCACCGAAGAAGAAGGCTGGTGCACAGAGAAATGCTATAGCTTCAGCTCTTAAAGTACAGAGGAAAATTATAAAAACCATAAATGAGAGTATGGATGAGCTCAGCAGAAACAGGAAAAGCATTTGGTGGAGGAGATGGATCCCAAGAGAGGAATGA 1716 0.419 MATVATRGIGVTNLHHPHNQKSLFLGQRLRFKPSNNESSPPSFTARFTPKAFHGGEWLHSVHNLFVGVGVGLPCTVMECGDMIYRSTLPRPSGLTVTIPGVVLAFGALSYLWATPGVAPGFFDMFVLAFVERLFRPTFRKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADFVYGFLERSTKKTPEYWLIWRFEGDATLADLLQSRDFPYNVETLLLGEVQDLPKGLERENRIIQTIIRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSTGLIFLQMAFPNLRTDNSLIQFNRQLKRCDYDLVAWRKTVEPRSSAELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPYFDKEGLLALSIMQNVRLKFFRATQQDYSEAAKWIIQLMAKSGTEKDGGFTEAQLQELREISPKKKAGAQRNAIASALKVQRKIIKTINESMDELSRNRKSIWWRRWIPREE* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2223 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Tpr2g2223 571 ProSitePatterns Protein kinases ATP-binding region signature. 149 176 IPR017441 GO:0005524
Tpr2g2223 571 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 11 571 IPR044803 GO:0004674|GO:0009579
Tpr2g2223 571 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 11 571 - -
Tpr2g2223 571 SUPERFAMILY Protein kinase-like (PK-like) 128 463 IPR011009 -
Tpr2g2223 571 SMART serkin_6 143 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2223 571 Pfam Protein kinase domain 145 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2223 571 Gene3D Transferase(Phosphotransferase) domain 1 252 466 - -
Tpr2g2223 571 Gene3D Phosphorylase Kinase; domain 1 130 223 - -
Tpr2g2223 571 CDD STKc_SNT7_plant 147 461 - -
Tpr2g2223 571 ProSiteProfiles Protein kinase domain profile. 143 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2223 Tpr-Chr2 26593630 26598429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2223 261 462 Core Cell Cycle Gene Families AT2G38620 30.516 1.04e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Tpr2g2223 Pkinase 6.2e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2223 2 26593630 26598429 Tpr2g2223 2 26593630 26598429 ECH