Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2062 ATGGAAGAGAAGAAGTTTGTTTGTAAGTATTGTAGCAAAAGGTATCCTTGTGGAAAATCTTTAGGTGGTCACATTAGGACTCATATGATGAGTGAAAATTCACTTCAAGCAAAAGAAGAAAAAAGAATCAATGCTAATGCTAATGTTAATGCTATGTTTAAGTTTGATGATGGAAGAAAGAGAAAGAGATTAGATTTAGGGTCTAGTGGAAGTGGTAGTGGTAGTGGTGGTGGTGGTGGTGGTGATGATGGTAACCTTATTTATGGTCTTAGAGAGAATCCCAAGAAAACATCAAGGTTTGTTCATTCCAATGTTGCTACTATTCAAATGGAGAAATTCTGCAAAGAATGTGGAAAAGGTTTTCCATCACTGAAAGCTTTGTGTGGTCACATGGCTTGTCACTCTGAGAAAGACAAAGGAACCAATAGGATTGAAAGTGTGTCTGGTGTCACTGAGAAGCATAAATTGGTTATGGATAGTCAATCAGATACCGAGGCTTCGGTTCCGACCGATACACGGAGATCCAAGAGAATGAAGTTCAAGAATCTTAACGGTGGTGACAACAGCCATCCACCTTCTTCCTCTTCGCTTCATTGGGGAAACTGTTCTTCTTCTGTTTCCGAGGTTGAGCAGGAACAAGAAGATGTTGCTAGGTGTTTGATGATGTTGTCTAGAGATGCTACTTACAAGGGTACTCGTTTTGCTATGGTGACAGAGTCTTCTGATAACAACTCGGTTGTTCTTGAAGCAAAATCGAAATCGCCTTCAGTTGATACCAAGTTTGCTGCTATGAAGAACATTGTTGGTGGTACTAAAAACAATGGTTTTGAGTTCCCGGAGAAGAAGCTGAACAAGGATGCGAAGATGAAATCGGTCGAAATTGGTTATGTTTCTGATAATTCTGATTCTGGGTATTTCACATATGGTCCTAGAAAAGTAGAATCAGATGATTCTAGTGACGCATTTTTCATGAATAATGATGTTAAGTCTTCGAAAGCTGTACTTATCTCTGGGTTTGAAGATCATGATTTTGATTCAAGGAAGAAGATAATGAGCAGCGAAAAAAGAAACAGAAACAATAATGAATTCAAGAAACTAGCTTTGGATGATTCAAGAAAGAGACAAAATTTTGTTGAAAGTTCTAGCAAGAAAAAAGCAAAAAATGGTACTTATAACAATGATGAAAACTATGAAAGTTTGAAAATTGAAAGAGAGAGTTTTTCTGAAGATTCGGCTTATGAAAGTGATGAAAACAGCACTGATAGTGATTCATATCCTGCTCCACCAAAGACACAAAGCAATAGGAACATAAATGCAAAGACTAAGAAGTTAACAAGCAAAGGAAAGAAGAAAATGAAGTCAAAGAAAAGCAAAGAACATGAGTGTCCAATTTGCAACAAGATTTTTAGGTCAGGACAAGCTTTAGGGGGCCACAAAAGGTCCCATTTTGTTGGAGGGAATATTGATGAAAACACTTTTGTGATAAGACCAGCTAATAGTGGTGCTGTTCAAGCTGCTCCTGCTGCTAATCCTTGCTTAATTGATCTTAATCTACCCGCTCCAGATGATGAATAA 1575 0.3771 MEEKKFVCKYCSKRYPCGKSLGGHIRTHMMSENSLQAKEEKRINANANVNAMFKFDDGRKRKRLDLGSSGSGSGSGGGGGGDDGNLIYGLRENPKKTSRFVHSNVATIQMEKFCKECGKGFPSLKALCGHMACHSEKDKGTNRIESVSGVTEKHKLVMDSQSDTEASVPTDTRRSKRMKFKNLNGGDNSHPPSSSSLHWGNCSSSVSEVEQEQEDVARCLMMLSRDATYKGTRFAMVTESSDNNSVVLEAKSKSPSVDTKFAAMKNIVGGTKNNGFEFPEKKLNKDAKMKSVEIGYVSDNSDSGYFTYGPRKVESDDSSDAFFMNNDVKSSKAVLISGFEDHDFDSRKKIMSSEKRNRNNNEFKKLALDDSRKRQNFVESSSKKKAKNGTYNNDENYESLKIERESFSEDSAYESDENSTDSDSYPAPPKTQSNRNINAKTKKLTSKGKKKMKSKKSKEHECPICNKIFRSGQALGGHKRSHFVGGNIDENTFVIRPANSGAVQAAPAANPCLIDLNLPAPDDE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2062 524 ProSitePatterns Zinc finger C2H2 type domain signature. 462 482 IPR013087 -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 169 183 - -
Tpr2g2062 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 460 482 IPR013087 -
Tpr2g2062 524 Pfam C2H2-type zinc finger 460 482 - -
Tpr2g2062 524 Pfam C2H2-type zinc finger 114 136 - -
Tpr2g2062 524 Pfam C2H2-type zinc finger 6 29 - -
Tpr2g2062 524 SMART c2h2final6 6 28 IPR013087 -
Tpr2g2062 524 SMART c2h2final6 460 482 IPR013087 -
Tpr2g2062 524 SMART c2h2final6 112 134 IPR013087 -
Tpr2g2062 524 SUPERFAMILY beta-beta-alpha zinc fingers 113 482 IPR036236 -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 186 202 - -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 350 457 - -
Tpr2g2062 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Tpr2g2062 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 382 396 - -
Tpr2g2062 524 SUPERFAMILY beta-beta-alpha zinc fingers 2 30 IPR036236 -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 442 456 - -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 350 381 - -
Tpr2g2062 524 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Tpr2g2062 524 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 524 - -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 397 411 - -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 157 202 - -
Tpr2g2062 524 MobiDBLite consensus disorder prediction 418 441 - -
Tpr2g2062 524 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 524 - -
Tpr2g2062 524 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2062 Tpr-Chr2 24718929 24721079 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g2062 zf-C2H2_6 1e-05 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2062 2 24718929 24721079 Tpr2g2062 2 24718929 24721079 ECH