Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2060 ATGGAAGACAAAGACAGAGCATCTTCTGATCCCGCCGGCGATTTCGTCGGAAAATCTAGCTGGAATCTCGGAGTCGATGATTCCGACGGTAGTCATTTCTTCACCGACGATAGAGAAAGAAATATGTTCGGCGACATCGGCTGGAATCTTGATCCGAACCGCGTCGACGAAGGATTGTTGCAACCGGTTCAAACTAGTTCGATCGAAACAGCACCGTCGTCATCTTACAGGTCAAATAATCAATCGGTTTCTTCAAGCTCCAGTGAGGATTTGCCGGAGAAATCTACCGTCTCCGATGAAAAACCGCCAGATACACTGAGTAAAAGTAAGAAGAAGGGGCAAAAGCGAGTACGGCAGCCGCGGTTTGCATTTATGACGAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGAGAAAGTATGGTCAGAAGGCAGTTAAAAACAGTCCATTCCCTAGGAGCTATTATAGGTGCACAAATAGCAAATGCACGGTGAAGAAAAGAGTTGAACGCTCTCACGAGGACCCAACAATTGTTATAACTACATATGAAGGCCAACACTGTCATCACACCGTTGGATTTCCTCGAGGTGGAATAATTAGTCATGAATCTTCCTTTTCAAGCCAGTTTGCTCCTACAATGCCTCAGTTCTATTATCCTATTCAATTACCTAGAGAATTAAACACTTGTACTACTACTACTACTACCACTGTTTCTCAGCCCTGCGAAAGACGTCATGATTATGAAGCTGGACGATCGAGTAGCGCTACAATGGCTGCGGCCGATGCATCACTGCCAGCATTGCCTCCTCCTCCAACCGATGAAGGACTGCTTGGAGATATTGTGCCCCGTGGAATGCGCAACAGGGATGAAAGAAATATTTGA 888 0.4583 MEDKDRASSDPAGDFVGKSSWNLGVDDSDGSHFFTDDRERNMFGDIGWNLDPNRVDEGLLQPVQTSSIETAPSSSYRSNNQSVSSSSSEDLPEKSTVSDEKPPDTLSKSKKKGQKRVRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSHEDPTIVITTYEGQHCHHTVGFPRGGIISHESSFSSQFAPTMPQFYYPIQLPRELNTCTTTTTTTVSQPCERRHDYEAGRSSSATMAAADASLPALPPPPTDEGLLGDIVPRGMRNRDERNI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2060 295 ProSiteProfiles WRKY domain profile. 128 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2060 295 SUPERFAMILY WRKY DNA-binding domain 125 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g2060 295 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 9 199 - -
Tpr2g2060 295 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 199 IPR044810 GO:0003700
Tpr2g2060 295 MobiDBLite consensus disorder prediction 57 121 - -
Tpr2g2060 295 MobiDBLite consensus disorder prediction 93 110 - -
Tpr2g2060 295 MobiDBLite consensus disorder prediction 1 22 - -
Tpr2g2060 295 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2060 295 MobiDBLite consensus disorder prediction 59 92 - -
Tpr2g2060 295 SMART WRKY_cls 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2060 295 Gene3D WRKY domain 120 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2060 Tpr-Chr2 24682587 24690100 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g2060 WRKY 3.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2060 2 24682587 24690100 Tpr2g2060 2 24682587 24690100 ECH