Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0311 ATGGGTTGTATTAGTTCAAAACATGCTACCAAAACAGCTTCTCCGGCTCCGACTCTCGGAGCAGTCGTCGACGTTGTTCCTTCATCAAAGAGTCATTCCGGTGTGTCGGTTTTGGAAGCAAAATCATCATTAGAGGAAAATAAGAATAGAAAATTCAAGAAAAATAGCTCGAAAAAAAGTGGCGCCGGCTCAGCATTCAGTTTCAAAATTGGATTTTCAGGAAGGTATGTTGAAGCAGAACAAAATGCAGCTGGTTGGCCTCCGTGGCTTACAGCTTCTGCAGCTGAAGCTGTTCAAGGTTGGATACCTCTTAAAGCTGATGCTTTTCAGAAGTTAGATAAGATTGGACAAGGTACATATAGCAGTGTTTTTCGAGCACGTGAAGTTGAAACTGGAAGAATGTTTGCTCTTAAAAAAGTGAGGTTTGATACATTCCAAGCTGAGAGTATAAGGTTCATGGCAAGAGAAATAACAATTCTAAGAAGGCTTGACCATCCAAACATAATGAAATTGGAAGGAATAATCACTTCTAAAATGTCAAATAGCTTATACCTTGTGTTTGAATACATGGAACACGATCTTGCTGGCCTAGTTTCTCGTCCTGATATTGTTTTCACCGATGCACAGATAAAATGTTACATGAGGCAGCTATTAAGTGGAATTGAACATTGTCATGTACGCGGAATCATGCATAGAGACATCAAAGTATCAAATATCTTGTTGAACAATGAAGGTGTTCTTAAGATAGGTGATTTTGGATTGGCAAACACAATTAGTCCTAACAATAAGCATCCGTTAACAAGTCGTGTAGTAACTTTATGGTATCGTCCTCCTGAGCTCTTGATGGGAGCAACCAATTATGGTGTATCAGTTGATCTTTGGAGTGTTGGATGTGTATTTGCTGAACTTTTTCTTGGAAAGCCTATTCTTAAGGGGAGAACCGAGGTTGAACAATTACACAAAATTTTTAAACTGTGTGGTTCTCCACCCGACGAGTTCTGGAAAAAGAACAAGCTTCCTCATTCAACAATGTTTAAACCTCAGGCTAATTACGAAAGCTCTCTTAAAGAAAGATGCGCAGATTTTCCTGAATCGGCTGTAAGTTTGCTCGAGACTTTACTGTCCATCGATCATACCAAGAGAGGCACCGCTTCCTCCGCTCTAATATCCGAGTATTTCAACACCAAGCCATATGCTTGTAATCCATCAAGCCTTCCAAAGTATCCACCTAGCAAAGAAATGGATGCTAAAAGTCTTGATGAGACTACTACTACATCCAGGAAAAAGACCGATAAAAGTCGAGAGGCTGCAACATCTAGAAGGCAACAAAGACGAGGCCCTAAAGGTTACCAAGATCAGAACCATTATGGTCAATCAACTTCAAAAGAGACATTTTCTCATACTAGAAAAGATGATGGTAGAGCTAATATACCAAAGGGAAAAGGAGGAAGTACTATTAGCAAAGATCACACAAAAACTACAATGGATGCAATGTTAGAGACTTCACAAAGGTTGAATGTTGCTGATGGTAATGGCTATAGTGTACCTGTACAAGTCAATGGAGGATCTCATGAGCTTGCATCATGGACAAAAAGAAGAAAACAAGATGCATCATCCACTTTATCAGATGGATCAAGAAGTAAAATTAGTGCATTGGATCCTAATTTTGCAAAAGGCACTTATGATTTAACAAATCAAAGAGTTTCCATGGATTTTGATCCAAAAGAATTAAGGAATGCACAGGGACAAAGAGACGAACAAGGTACATATTGGAATGATGGTGTGCGGCGCGCAGCCCGTAAATCAAGATTTGGAAGAGATGTATGA 1827 0.3946 MGCISSKHATKTASPAPTLGAVVDVVPSSKSHSGVSVLEAKSSLEENKNRKFKKNSSKKSGAGSAFSFKIGFSGRYVEAEQNAAGWPPWLTASAAEAVQGWIPLKADAFQKLDKIGQGTYSSVFRAREVETGRMFALKKVRFDTFQAESIRFMAREITILRRLDHPNIMKLEGIITSKMSNSLYLVFEYMEHDLAGLVSRPDIVFTDAQIKCYMRQLLSGIEHCHVRGIMHRDIKVSNILLNNEGVLKIGDFGLANTISPNNKHPLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDEFWKKNKLPHSTMFKPQANYESSLKERCADFPESAVSLLETLLSIDHTKRGTASSALISEYFNTKPYACNPSSLPKYPPSKEMDAKSLDETTTTSRKKTDKSREAATSRRQQRRGPKGYQDQNHYGQSTSKETFSHTRKDDGRANIPKGKGGSTISKDHTKTTMDAMLETSQRLNVADGNGYSVPVQVNGGSHELASWTKRRKQDASSTLSDGSRSKISALDPNFAKGTYDLTNQRVSMDFDPKELRNAQGQRDEQGTYWNDGVRRAARKSRFGRDV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0311 608 MobiDBLite consensus disorder prediction 527 547 - -
Tpr2g0311 608 MobiDBLite consensus disorder prediction 407 491 - -
Tpr2g0311 608 PANTHER CELL DIVISION PROTEIN KINASE 1 602 - -
Tpr2g0311 608 MobiDBLite consensus disorder prediction 413 448 - -
Tpr2g0311 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Tpr2g0311 608 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0311 608 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Tpr2g0311 608 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Tpr2g0311 608 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0311 608 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0311 608 CDD STKc_CDK9_like 109 393 - -
Tpr2g0311 608 Gene3D Transferase(Phosphotransferase) domain 1 192 434 - -
Tpr2g0311 608 PANTHER CYCLIN-DEPENDENT KINASE 1 602 - -
Tpr2g0311 608 SUPERFAMILY Protein kinase-like (PK-like) 104 398 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0311 Tpr-Chr2 3775749 3779932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0311 101 447 Core Cell Cycle Gene Families AT5G10270 45.455 6.10e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr2g0311 Pkinase 2.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0311 - - gmx:100790917 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0311 2 3775749 3779932 Tpr2g0311 2 3775749 3779932 ECH
Tpr6g3126 6 33796976 33802301 Tpr2g0311 2 3775749 3779932 ECH