Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3901 ATGACATGTTCTCGCTGGTTTTGTTCTCTTCGTATATCAGGTAGATCACGAAAAAAATGTGATGAGGAAGATGGCTTGCGTAGCAAGCCAAATGTAAATGAAGAATATCTCCAAACATTTAGAACAGAATCTTATATGGAAATATGCAACAAAGCACAAAGGCAATCTGGGAAGAGAATTAGCACCAAAAGACTCTCTTCCTCTTCTTCAACATCTCCCCTTCCTCCCATATGCTTGAATCTCACTGACTCATTGCTCGAACCACGACAAGAAATCATCGCAAACTTGATACAAAATTTCAAGGTGCATAATCTTCTAGTGGACTATTTCGAAGCTAGCTTAGAAGCATGTCGTTATTGTGACACAATTCTTGAAGGAATCCACTCAACAAGACTTTCTTATACAAGAATCACAAGAGTTGTTAAGCTAAGCAAAAGGGTATTAATAAATTTCAATGATAGCACCAATGAACAAACAAAAAAGGATATATACAAAGAGCTTGATTCATTTTCATCAAAACTACAAAATAATCATTTGTCCGTTATTAGCACAACGCAATTCAGCAACATTCACAATAAGTACATGGAACTTCTTCAAAGACTAACATCAAAGAGAAAAAGAATTAAAAGAAGACTAACATTGATTAGTGTTTGCAAGAAAGTTGGAGGAATTGCTCTTGTTACTTCACATGGTGCTATTCTTATTGCTTTATTAGTGGTTTCATTACACAGTGTTGTTGGGTTGGTGGCTGCTCCAAGTATTGTTGGTGGTTTAGTTGGTTTGTTCATAAATAGAATCAAAATTAGGATAAAGAAAAGAACAAAGTGTGAAAGATTATGTGAACAACTTGATGCTGCTGCAAAAGGGGTTTTTATATTGATAAATGATTTGGATACTATGAGTAGGATGGTGAAGAGGTTGAATGATGAAGTGGAACATAGAAAAATGATTGCTGATGTTTGTGTGAAGAATGTTGGTAGTAAATGTGAAATAATGAAGCGTGTTATGAGTGAATTTAGTGATCATGATGGTAGCTTTTTGGAGCAATTGGAAGAGCTTGAAGAACATGTTTACTTGTGCTTTCTCACTGTTAACAAATCCAGGAGACTTGTTATGCAACAAATTACAGAGAGACCACAACATTAA 1146 0.3508 MTCSRWFCSLRISGRSRKKCDEEDGLRSKPNVNEEYLQTFRTESYMEICNKAQRQSGKRISTKRLSSSSSTSPLPPICLNLTDSLLEPRQEIIANLIQNFKVHNLLVDYFEASLEACRYCDTILEGIHSTRLSYTRITRVVKLSKRVLINFNDSTNEQTKKDIYKELDSFSSKLQNNHLSVISTTQFSNIHNKYMELLQRLTSKRKRIKRRLTLISVCKKVGGIALVTSHGAILIALLVVSLHSVVGLVAAPSIVGGLVGLFINRIKIRIKKRTKCERLCEQLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMIADVCVKNVGSKCEIMKRVMSEFSDHDGSFLEQLEELEEHVYLCFLTVNKSRRLVMQQITERPQH* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3901 381 Coils Coil 191 211 - -
Tpr1g3901 381 Pfam Protein of unknown function (DUF677) 92 375 IPR007749 -
Tpr1g3901 381 PANTHER UPF0496 PROTEIN 2-RELATED 15 378 - -
Tpr1g3901 381 PANTHER UPF0496 PROTEIN 3-RELATED 15 378 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3901 Tpr-Chr1 43126183 43128095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3901 1 43126183 43128095 Tpr1g3901 1 43126183 43128095 ECH