Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3895 ATGGAAAGATTAATGCAGGTAAGATTAGTGACAGTTTTTGTTGTTTTATTGGGTAGAGTATCCAATATTGCAATTGCACAAACTACAAATGCAGCATTTCCTGCTGTGTTTGCATTTGGTGACTCAATCTATGACACTGGAAATAATAACAACCTTTTAACTGCATCTAAGTGTAATTTTCCTCCCTATGGGAAGGATTTCTACGGAGGAAAGGCTACCGGAAGATTCGGTAACGGCAGAGTTCTATCAGATTTGATAACTTCGGCCTTGGGTGTGAAAGACACATTGCCAGCATTCTTGAATCCAGCTTTAACGGCTCAAGACCTTCCTACTGGGGTATGCTTTGCATCAGGTGGTTCAGGTTTAGACGATTTGACAGCAAACATGCAAGGAGGAGTATTGACAATGGGCGCTCAACTGAACCTGTTCCGACAATACATAGAAAAGCTGAAAGCAGTTGTTGGAGCAGATAAGGCGGCCGATATAATATCTAAAGCTTTGTTTATAATATCGGCAGGAAACAATGACGTTGCATTTGCTTATTCTTTTACTATAAGAAGAGCTTTGCCTTTCAATGTATATGCCGCTACTTTAGTTAGCGCAAGTCAAAATTTTCTCAAGAGTCTATATCAATTGGGCGCACGACATGTGTGGGTTCAAAGTACAGTGACATTGGGATGCTTACCAGCAGCTAGATCAACATTGGGTGGACCACTGAGGTTTTGTGTAGATTATGAGAATATCTACGCACAACAATTTAATGGCATGTTATCAGCAGGTGTTGCAAATCTTAAAAGCACCCTTCCTGATTATGATCTTAGATTTGTTGATGTCTATACTCCAATGCTTCGTCTCATACAAAATCCTTCTGCAGCAGGGTTCGTAAATGTGTGGAACGGGTGCTGTGGAACAGGAACATTTGAAATGGGACCTGCATGCAATGCATTTACATTCCAATGTCCAAGTACTTCACAATACTTTTTTTGGGATGTTGCTCATCCTACTGAGAGAGCTTATCAAGCCACTCTTGCTCAATTGCTACATGCTCAAAACTACGATCTTAACAGTTACAATATTTCCAAAACTCTTCATCCTTTAAATGTATCAAATCTTATATTTTAA 1122 0.3966 MERLMQVRLVTVFVVLLGRVSNIAIAQTTNAAFPAVFAFGDSIYDTGNNNNLLTASKCNFPPYGKDFYGGKATGRFGNGRVLSDLITSALGVKDTLPAFLNPALTAQDLPTGVCFASGGSGLDDLTANMQGGVLTMGAQLNLFRQYIEKLKAVVGADKAADIISKALFIISAGNNDVAFAYSFTIRRALPFNVYAATLVSASQNFLKSLYQLGARHVWVQSTVTLGCLPAARSTLGGPLRFCVDYENIYAQQFNGMLSAGVANLKSTLPDYDLRFVDVYTPMLRLIQNPSAAGFVNVWNGCCGTGTFEMGPACNAFTFQCPSTSQYFFWDVAHPTERAYQATLAQLLHAQNYDLNSYNISKTLHPLNVSNLIF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3895 373 CDD SGNH_plant_lipase_like 34 349 IPR035669 -
Tpr1g3895 373 Pfam GDSL-like Lipase/Acylhydrolase 36 341 IPR001087 GO:0016788
Tpr1g3895 373 Gene3D SGNH hydrolase 23 352 IPR036514 -
Tpr1g3895 373 PANTHER GDSL ESTERASE/LIPASE EXL3 1 353 - -
Tpr1g3895 373 SUPERFAMILY SGNH hydrolase 36 346 - -
Tpr1g3895 373 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 353 - -
Tpr1g3895 373 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3895 Tpr-Chr1 43081081 43083024 Tandem