Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3892 ATGTTGATGAATCTCACAGCAGGTTCTCCAATGAATTGTTCATTCTTCCTTCGTTTTCTCATTGTATTACTTGCTTTATGCTACAAAACAATGGGTGTGATAAAACTACCACCAAATGTTACGGTTCCAGCAGTGATAGCATTTGGAGATTCAATAGTTGACTCAGGAAACAACAACAACCTCAAAACTTTGGTCAAATGCAACTTCCCTCCTTATGGAAAAGATTTTCAAGGTGGTGTTCCAAGTGGTCGATTTTGCAATGGCAAAATTCCTTCAGATATAATAGCTGAAGAATTGGGTATCAAGGGGTATGTCCCTGCATATTTGGATCCAAATCTCAAATCAAGTGATCTTCTTACGGGCGTAGGGTTTGCCTCTGGAGCTTCAGGATACGATCCTTTGACACCACAAATTGCGTCAGTGATACCATTATCTGCTCAACTAGACATGTTCAAAGAATACATAGGAAAACTGAAAGGCATTGTTGGAGAGAAAAGAACAAACTTCATACTATCCAACAGTCTTTTTATTGTGGTGGGAGGCAGTGACGACATTGCCAACACATATTATGTTGTTCATGCAAGATTGCAATATGACATTCCTGCTTATACAGACCTTATGTCCAACTCAGCCATTAATTTTGTAAAGGAAATACATAAACTTGGAGCTCGTAGAATTGCTGTACTGAGTGCACCACCAATTGGATGTGTTCCATCACAGAGAACTCTTGCAGGAGGGATTGTAAGAGAATGTGCAGAAAAGTATAATGATGCTGCAAAATTATTTAACTCCAAAATCTCCAAGGAGCTTGATTCCTTCAATCACAACTCACCCAATAGCAGGATTGTTTATATTGATGTTTACAACCCTCTACTTGATATCATTCTCAACTATCAAAAATATGGATACAAAGTTGTGGATAGAGGTTGTTGTGGCACCGGAAAATTAGAGGTTGCAGTGTTATGCAACCCTTTGGATACTACTTGTTCTAATGCCTCTGAATATGTTTTTTGGGATAGTTATCATCCTACTGAAGGGGTATACAGACAGCTCGTAACTATAGTCCTTCATAATTATTTGAACAAATTGATATAA 1095 0.3808 MLMNLTAGSPMNCSFFLRFLIVLLALCYKTMGVIKLPPNVTVPAVIAFGDSIVDSGNNNNLKTLVKCNFPPYGKDFQGGVPSGRFCNGKIPSDIIAEELGIKGYVPAYLDPNLKSSDLLTGVGFASGASGYDPLTPQIASVIPLSAQLDMFKEYIGKLKGIVGEKRTNFILSNSLFIVVGGSDDIANTYYVVHARLQYDIPAYTDLMSNSAINFVKEIHKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNSKISKELDSFNHNSPNSRIVYIDVYNPLLDIILNYQKYGYKVVDRGCCGTGKLEVAVLCNPLDTTCSNASEYVFWDSYHPTEGVYRQLVTIVLHNYLNKLI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3892 364 PANTHER GDSL ESTERASE/LIPASE EXL3 14 362 - -
Tpr1g3892 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 362 - -
Tpr1g3892 364 CDD SGNH_plant_lipase_like 43 359 IPR035669 -
Tpr1g3892 364 Gene3D SGNH hydrolase 36 359 IPR036514 -
Tpr1g3892 364 Pfam GDSL-like Lipase/Acylhydrolase 45 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3892 Tpr-Chr1 43050785 43056251 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3892 1 43050785 43056251 Tpr1g3892 1 43050785 43056251 ECH
Tpr1g3892 1 43050785 43056251 Tpr7g0218 7 1786738 1790335 PCT