Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3890 ATGATGAAGTTCCCAACTTATTCTTTTTCCACTTCAATTTGCACTGCACTTCTCTTCCGTTTGACTATATTATGTTTAGCTGTTTTCTACCAAACAAAAGCTGCTTTGAAACTGCCACCAAATGCTTCAATTCCAGCAGTGATTGTGTTTGGAGATTCCATCATGGATACGGGAAATAATAACAACATGACAACACCCTCTAGGTGCAATTTCCCTCCATATGGCAAAGATTTTCAAGGAGGAATTCCAACCGGGAGATTTAGCAACGGAAAGGTTCCATCAGATCTTATAGTTGAAGAATTGAGCATTAAAGAGTATTTGGCAGCATATTTGGATCCAAATCTCCATCCTAGTGATTTGGTCACGGGCGTTAACTTTGCATCCGGTGGTGCAGGATATGATCCTTTGACATCAAAATTAGAGCAGGCAGCTATATCTATGTCTGGGCAGCTAGACTTATTCAAAGATTACATTGTGAGGCTTAAAGGAGTTGTTGGTGAAGATAGAACAAACTTGATCTTAGCCAATAGTGTTTTTTTTGTGCTATTAGGAAGCAATGATATTTCTAACACATACTACTTAACTCATTTGAGACAAGTGCACTATGATTTTCCTACATACTCTGACCTTTTAGTCAACTCAGCTTATAATTTTTACAAGGAAATATATGAACTAGGTGCAAGGAGGATTGGAGTATTCAATGTGCCACCAATTGGGTGTGTGCCTTTTCAAAGAACAATAGCTGGTGGAATAACAAGAAAATGTGTTCAATTGTACAATGACGCAGTTGTGCTCTTTAACAACAAATTATCAATGGGGATTGATTCCTTTAAGCAGGACTTCCCAAGTAGCAAGATTGTTTACATGGATATTTACAGCCCTATACTTGATATCATTCTAAACTATCAAAAATATGGATATAAAATTGGAGACAGGGGGTGTTGTGGCACAGGCAAAATAGAAGTTACTTATTTGTGCAACCATTTGGATCCAATTTGTTCCAACGATTTGGATTATGTTTTCTGGGATAGTTTTCATCCTACTGAAAGCACTTACAAAAAACTTGTTGCTCCTATTCTACAGAAATACATGCACAAGTTGCTGTGA 1107 0.3731 MMKFPTYSFSTSICTALLFRLTILCLAVFYQTKAALKLPPNASIPAVIVFGDSIMDTGNNNNMTTPSRCNFPPYGKDFQGGIPTGRFSNGKVPSDLIVEELSIKEYLAAYLDPNLHPSDLVTGVNFASGGAGYDPLTSKLEQAAISMSGQLDLFKDYIVRLKGVVGEDRTNLILANSVFFVLLGSNDISNTYYLTHLRQVHYDFPTYSDLLVNSAYNFYKEIYELGARRIGVFNVPPIGCVPFQRTIAGGITRKCVQLYNDAVVLFNNKLSMGIDSFKQDFPSSKIVYMDIYSPILDIILNYQKYGYKIGDRGCCGTGKIEVTYLCNHLDPICSNDLDYVFWDSFHPTESTYKKLVAPILQKYMHKLL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3890 368 Pfam GDSL-like Lipase/Acylhydrolase 47 356 IPR001087 GO:0016788
Tpr1g3890 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 17 364 - -
Tpr1g3890 368 SUPERFAMILY SGNH hydrolase 46 363 - -
Tpr1g3890 368 PANTHER GDSL ESTERASE/LIPASE EXL3 17 364 - -
Tpr1g3890 368 CDD SGNH_plant_lipase_like 45 363 IPR035669 -
Tpr1g3890 368 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Tpr1g3890 368 Gene3D SGNH hydrolase 34 365 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3890 Tpr-Chr1 43035302 43041440 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3890 1 43035302 43041440 Tpr1g3890 1 43035302 43041440 ECH
Tpr1g3890 1 43035302 43041440 Tpr7g0219 7 1794961 1798040 PCT