Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3882 ATGAGGAAGTGGACGATCCCTTCCGTTCTTCTTCTTTTCTCTCTTCTTCTTCTCTTCGCAGATCAAGGTCAAAAGTTTCAAGCGAATGCGGAAGGTAGTTCCGATGATCTTGTAGATCCACCGAAGGTGGAGGATAAGATCGGCGCTGTTCCACATGGACTTTCAACCGATTCAGATGTAGTTAAGAGGGAATCGGAATCGATCTCCAAGAGATCGCTTCGGAGTAACGCGGAGAAGTTTGAGTTTCAAGCGGAAGTGTCAAGACTTATGGATATTATTATCAATTCACTCTATAGTAACAAAGATATTTTCCTTAGGGAACTTATTTCAAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTTTCCCTCACTGATAAGGAAATTTTAGGTGAAGGTGACAACACCAAGCTTGAAATTCAGATTAAGTTAGATAAGGAAAAGAAAATTCTATCTATTAGAGACAGAGGTATTGGTATGACAAAGGAGGATTTAGTAAAGAATTTGGGTACCATAGCAAAGTCTGGAACTTCAGCCTTTGTTGAGAAAATGCAGACAAGTGGTGATCTCAATTTAATTGGGCAATTTGGAGTTGGATTCTACTCTGTGTATCTTGTGGCTGACTATGTTGAAGTTATTAGCAAGCATAATGATGACAAACAGTATGTTTGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCACTAGGACGTGGAACGGAGATTAAAATACACCTCAAAGAAGAGGCCGGGGAGTACGTCGAAGAGTTTAAGCTCAAAGAATTGGTGAAGAGATATTCTGAATTTATTAACTTCCCTATCTATATTTGGGGAAGCAAAGAGGTTGATGTGGAGGTTCCTGCCGATGAAGATGAGTCCAGTGAGGAAGAGGAGTCAACTGAAAGTACCTCCAAGGAAGAAGGTGAAGATGAAGATGCTGAAAAAGATGAAGATGAAGAGAAAAAGCCTAAAACAAAGACAGTGAAGGAAACAACTCACGAGTGGGAACTATTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAAGTTACAGAAGAAGAGTACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGCGATGATAAACCTTTAGCATGGAGCCATTTTACTGCTGAAGGTGATGTTGAGTTCAAAGCAGTCCTTTATGTGCCACCTAAAGCACCTCAGGACTTATATGAGAGTTATTACAATTCAAATAAATCCAACCTGAAGTTGTATGTTAGACGAGTGTTCATTTCAGACGAATTTGATGAACTGTTGCCCAAGTATTTGAGCTTTTTGAGCGGCCTTGTTGATTCTGACACTTTACCACTGAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTGAAGACAATAAAAAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAAGCTTGCTGAAGAGGATCCTGATGAGTCCACTGATAAAGAAAAGAAAGAAGAGACATCCTCTGACATTGAAGAGAAGCGAGGTCAATACACTAAGTTCTGGAATGCATTTGGAAAATCCATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGATTGGCAAAACTACTAAGATTTGAGACCACCAAGTCCGAGGGTAAATTGACATCTCTTGATCAGTACATATCTAGAATGAAAGCTGGACAAAAAGATATCTTCTACATAACTGGAACCAGCAAAGAGCAACTGGAAAATTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAACTTTGAGGTTATTTTCTTCACGGATCCAGTGGATGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAAGGTCTGAAACTCGGGAAGGATTCAAAAGACAAGGAACTAAAGGAATCCTTCAAGGATCTAACTAAGTGGTGGAAAAATTCCCTTTCAAACGATAATGTTGATGATGTGAAGATATCCAACCGATTGGATAACACTCCTTGTGTAGTTGTGACATCAAAATTTGGTTGGAGTGCAAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCAGACGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGATCAATCCTAGACACCCTATTATCAAGGAACTCCGGGAGAGAGTAGTGAAGAACCCTGAGGATGAGAGTGTGAAGCAAACGGCACAGTTGATATACCAGACTGCACTCTTCGAAAGTGGTTTCTTGTTGAATGATCCCAAGGATTTTGCTTCTAGAATTTATGATTCAGTGAAAACTAGTTTAGATATCAGTCCTGATGCAACAGTTGAAGAGGAAGATGAGAACGAAGTTGAGACTGAAAGTGAGACAAAAGAAGAAGCTGCTACTTCAAATCAAGCTGATGAGGTAAATGATGATGGTGATGTCAAGGACGAGTTGTAG 2457 0.3993 MRKWTIPSVLLLFSLLLLFADQGQKFQANAEGSSDDLVDPPKVEDKIGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEILGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLVKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKIHLKEEAGEYVEEFKLKELVKRYSEFINFPIYIWGSKEVDVEVPADEDESSEEEESTESTSKEEGEDEDAEKDEDEEKKPKTKTVKETTHEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDDKPLAWSHFTAEGDVEFKAVLYVPPKAPQDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLSGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDESTDKEKKEETSSDIEEKRGQYTKFWNAFGKSIKLGIIEDATNRNRLAKLLRFETTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKNSLSNDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKQTAQLIYQTALFESGFLLNDPKDFASRIYDSVKTSLDISPDATVEEEDENEVETESETKEEAATSNQADEVNDDGDVKDEL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3882 818 MobiDBLite consensus disorder prediction 293 336 - -
Tpr1g3882 818 MobiDBLite consensus disorder prediction 778 793 - -
Tpr1g3882 818 Gene3D - 66 301 IPR036890 -
Tpr1g3882 818 Gene3D - 634 780 IPR037196 -
Tpr1g3882 818 PANTHER BNAA08G14800D PROTEIN 19 806 - -
Tpr1g3882 818 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Tpr1g3882 818 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Tpr1g3882 818 MobiDBLite consensus disorder prediction 293 323 - -
Tpr1g3882 818 MobiDBLite consensus disorder prediction 772 818 - -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Tpr1g3882 818 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Tpr1g3882 818 Pfam Hsp90 protein 259 799 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tpr1g3882 818 Gene3D - 347 539 - -
Tpr1g3882 818 SUPERFAMILY HSP90 C-terminal domain 646 768 IPR037196 -
Tpr1g3882 818 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Tpr1g3882 818 Gene3D - 540 627 - -
Tpr1g3882 818 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 806 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tpr1g3882 818 SMART HKATPase_4 100 257 IPR003594 -
Tpr1g3882 818 CDD HATPase_Hsp90-like 87 277 - -
Tpr1g3882 818 Hamap Chaperone protein HtpG [htpG]. 75 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tpr1g3882 818 SUPERFAMILY Ribosomal protein S5 domain 2-like 348 627 IPR020568 -
Tpr1g3882 818 PIRSF HSP90_HTPG 54 813 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tpr1g3882 818 MobiDBLite consensus disorder prediction 487 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3882 Tpr-Chr1 42940956 42946156 Transposed