Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3875 ATGATCCGATTCATTCTGTTACAGAACAGGCAGGGTAAGACCCGTTTAGCCAAATACTATGTTCCTCTCGAAGATTCCGAGAAGCATAAGGTCGAATACGAGGTTCATCGTCTTGTCGTTAATAGAGATCCCAAATACACTAACTTTGTTGAGTTTCGTACACACAAGATAATATACAGGAGATATGCTGGATTGTTTTTCTCACTTTGTGTTGACATTACTGATAATGAATTGGCTTATTTAGAGTGCATTCATTTGTTTGTTGAAATCTTGGATCACTTCTTCAGCAATGTTTGCGAACTTGATTTGGTTTTTAACTTCCACAAGGTCTATCTTATACTTGATGAATTCATTCTAGCGGGTGAATTGCAAGAAACAAGCAAGAAGGCTATCATTGAGAGAATGGGGGAACTTGAAAAACTAGAGTGA 429 0.3753 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKIIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKLE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3875 142 PANTHER AP COMPLEX SUBUNIT SIGMA 2 142 - -
Tpr1g3875 142 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 142 IPR016635 GO:0015031
Tpr1g3875 142 SUPERFAMILY SNARE-like 1 136 IPR011012 -
Tpr1g3875 142 PIRSF AP_complex_sigma 1 142 IPR016635 GO:0015031
Tpr1g3875 142 CDD AP2_sigma 1 141 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Tpr1g3875 142 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
Tpr1g3875 142 Gene3D - 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3875 Tpr-Chr1 42869760 42871955 Dispersed