Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3868 ATGAGTAGTGAAAATAATAATAATAAATCGAGAATGACATGGGAAGGTTGCAGCGTATTGCTTGATATCAACGACGGTGATCGTCTCGTTTTCGCTCGTCTTTCTCCTGCTGCGAAATTGAAGATTGGAAATAAGAATTGTTCACTGCAACCATTGATCGGTTGTCCCTTCGGAACTGTTTTTCAACTTGATTCTTCTTCTGATGCTGCTGCTTTTTTATCGCCTTTCCAATCTAAAGGTAGTGTTAATAACACTGAAGAAATAAAAGACGGTCAATTCCAAGTTGAGTCAAAAGATGGTCAACCCAGTGGTGAGTCGAAGGACAACCGGTCGTTGATCGACAATAATACTGCCCAAAGCCTCACCGGTGAAGATATAGAAGATATGCGAAGGCAGGGTGCTAAGGGTAATGAAATAATTGAAGCTCTGATTGCCAATAGTGCAACATTTGATAAGAAAACATCATTCTCACAGGAGAAATATAGACTTAAGAAGCAGAAGAAATATGCACCAAAAGTACTTATAAGGCGTCCTGTAGCTCGAAGTATATGTGAGGCCTATTTCAAGAAGTATCCATTGAAAATTGGATTCTTGCGGGTGGACACATTGTCCCTTCTACTTTCGATGGCTAATGTTTCTTCAAATTCTGACATTCTCGTTGTTGACATGGTTGGTGGCCTTCTTACTGGTGCTGTGGCAGAACGTTTAGGAGGAACTGGTTTTGTATGCAACTCATACCTTGGACAGGCACCCTCCATGGATATTGTGAGGATATTTAATTTAAGCGATGAAATCTGCAAGAGAATTGTAAGGACTTCCGTTTCTGACTTGTTGTCACAAAAGGAATCACCCGAACAAAATCCGAAACATGATGTTGGCAGTTTGGAAAGTCAGTCAAATGATCAAATGAATGCATCAGTCAGCATGGAGGAAATCTCTCATTCATCAGAAAATGTAATTTCTGATGTTGGTGCTGAGAATGCTGAGAATAGCTCATTTCCTGCTCTAAGAGCTTGCAAAGCTATAAAAGCTGGAGAAAAAGCATCTCAAGAAATGATTGACTCGTGGAAGGAAAATGGTTTTTCTAGCCTAATTATTGCTGCACCAGACTTGGATACTTGGACATTGGTTAAAGACCTCTTACCACTTTTATCAAACTCTGCCCCATTTGCTATTTATCATCAATATCTTCAGCCTCTGGCAACCTGCATGCACAATCTACAGCTTGAGAAAATGGCCATTGGATTGCAAATAACAGAGCCTTGGCTACGCGAATACCAGGTACTTCCATCAAGAACTCACCCGTGCATGCAAATGAGTGCATTTGGGGGCTACATTCTCAGTGGGACAAAGATCAGTAGCAGCTGA 1368 0.4094 MSSENNNNKSRMTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQLDSSSDAAAFLSPFQSKGSVNNTEEIKDGQFQVESKDGQPSGESKDNRSLIDNNTAQSLTGEDIEDMRRQGAKGNEIIEALIANSATFDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARSICEAYFKKYPLKIGFLRVDTLSLLLSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYLGQAPSMDIVRIFNLSDEICKRIVRTSVSDLLSQKESPEQNPKHDVGSLESQSNDQMNASVSMEEISHSSENVISDVGAENAENSSFPALRACKAIKAGEKASQEMIDSWKENGFSSLIIAAPDLDTWTLVKDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKISSS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3868 455 MobiDBLite consensus disorder prediction 277 304 - -
Tpr1g3868 455 MobiDBLite consensus disorder prediction 290 304 - -
Tpr1g3868 455 Pfam Gcd10p family 18 291 IPR017423 GO:0030488|GO:0031515
Tpr1g3868 455 MobiDBLite consensus disorder prediction 94 124 - -
Tpr1g3868 455 MobiDBLite consensus disorder prediction 94 123 - -
Tpr1g3868 455 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 9 454 IPR017423 GO:0030488|GO:0031515
Tpr1g3868 455 PIRSF TRM6 3 455 IPR017423 GO:0030488|GO:0031515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3868 Tpr-Chr1 42810495 42816662 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3868 1 42810495 42816662 Tpr1g3868 1 42810495 42816662 ECH