Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3863 ATGGAAATTCATCAACAAAAACAACAATCCATGAAGTTGAGTAGTAGTAGTAAGTTCAAACGTATTTGTGTCTTTTGTGGCACCAGCCTTGGCAAAAATCCAAGCTACCAACATGCTGCCATTCAATTTGCCAAACAACTGGTGGAGAGGAACATTGATTTGGTATATGGAGGAGGAAGCAATATTGGTTTGATGGGTTTAATATCTCAAGTTATGTTTGATGGAGGACGCCATGTCATAAGGGTCATCCCTAAGACTAAGACTCTCATGCCAAGAGAGATAACAGGAGAGAGTATCGGAGAAGTTTGGACTGTATCGGACATGCACCAACGCAAGGCCGAAATGGCTCGACAAGCTGATGCTTTTATCGCCTTGCCAGGTTACTTACTTTTCACTCCAATAAAGAAAGATAATCAATCTTTGGTCACAAATAATATATTAGTTTGGCATTTAACACTAAATTCTTTTAAGATATATTATACAGGTGGGTATGGCACTCTGGAAGTACTATTGGAAGTGATTACCTGGGCTCAACTAGGAATCCATGATAAACCCGTGGGACTGTTGAACGTGGATGGGTACTATAACTCGTTGCTGTCATTCATAGACAATGCTGTAAATGAAGGTTTCATAACACCTGATGCCCGTCATATTATTGTGTCTGCCCATACTGCCCAAGACCTCATGTGCAAGCTTGAGGAATACGTCCCCAAGCACTGTGGTGTGGCCCCAAAGCAACGTTGGGAGAATGACCAGGAGTTCATAAACAATTAA 774 0.4147 MEIHQQKQQSMKLSSSSKFKRICVFCGTSLGKNPSYQHAAIQFAKQLVERNIDLVYGGGSNIGLMGLISQVMFDGGRHVIRVIPKTKTLMPREITGESIGEVWTVSDMHQRKAEMARQADAFIALPGYLLFTPIKKDNQSLVTNNILVWHLTLNSFKIYYTGGYGTLEVLLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDNAVNEGFITPDARHIIVSAHTAQDLMCKLEEYVPKHCGVAPKQRWENDQEFINN* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3863 257 Gene3D - 8 234 - -
Tpr1g3863 257 SUPERFAMILY MCP/YpsA-like 18 127 - -
Tpr1g3863 257 Pfam Possible lysine decarboxylase 65 127 IPR031100 -
Tpr1g3863 257 Pfam Possible lysine decarboxylase 158 231 IPR031100 -
Tpr1g3863 257 PANTHER LOG FAMILY PROTEIN YJL055W 10 127 - -
Tpr1g3863 257 PANTHER LOG FAMILY PROTEIN YJL055W 158 252 - -
Tpr1g3863 257 SUPERFAMILY MCP/YpsA-like 158 235 - -
Tpr1g3863 257 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 158 252 - -
Tpr1g3863 257 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 10 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3863 Tpr-Chr1 42761577 42764369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3863 1 42761577 42764369 Tpr7g0247 7 1999523 2002113 PCT