Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3841 ATGACCACCACCTACCTCCTCTTCCTTCTTCCAATTCTCATAGCCACCATCATCACATCTCCGGTAGCCGCAGCCGGTGGACAATGGCGAGTACTCCAAAAAAGCATCGGCGTTGTAGCCATGCACATGCAACTTCTTCACAACGACCGCATTGCCATATTCGACCGTACTGACTTTGGCTTATCAAAGCTTCCTTTACCCAATGGAAAATGTCGTCACGACCCGAGAGAAACCACGGTTAGAAACGATTGCACAGCTCATTCAGTCGAATATGATGTAAAATCTAACACTTTCCGTGCATTGTTCGTTGAAACCGATGTTTGGTGTTCTTCCGGATCAGTGAATCCCGTCGGAACACTCATCCAAACTGGTGGCTTCAACGATGGAGACCGCAATGTTCGAATCTTTGAACCTTGTAATGGTTGTGATTGGCGGGAAATTCAAGGCGAACTTGGTGCTCGGAGATGGTATGCTACCAATCATGCTCTACCGGACGGCCGTCAAATTATCATCGGCGGTAGACAACAATTCAACTATGAGTTTTACCCCAAAAACGGTGGTGCAAATGTAATTAACTTACCATTTTTGGCTCAGACCAATGAACCTGGTGCAGAGAATAATTTGTACCCTTTTGTTTTTCTCAATGTGGATGGCAACCTCTTCATCTTTGCTAACAACAGAGCTATCCTCTTTGATTATACTAAGAATGCCGTGGTGAGACAATTTCCACAAATACCAGGTGGGGAACCTAGGAGTTATCCAAGCACTGGTTCAGCGGTATTGTTGCCATTAAATCTCCAAGCAAGAAACTTAGAAGCTGAGGTTTTGATTTGTGGTGGAGCTCCAAAAGGAGCTTTTCAAAAAGTAGCAAAGAACGAGTTTGTCGGAGCTTTGAATACTTGTGCCCGAATTAAAATTACCGATCCAAATCCAAGATGGGTTTTGGAGAAAATGCCCGGGGCTAGACTCATGGGTGATATGATAACACTTCCGAACGGTGAAGTTTTGATTATTAATGGAGCAGCTGCGGGTGCAGCCGGGTGGGAAACCGGACGCAACCCAGTTTTAAACCCGGTTATTTACAAACCCAATAACCCAATTGGGGCACGGTTTGAATCACAAAACCCGTCTAATACACCCCGAATGTATCATTCTACTGCTATTTTGCTTCGTGATGGGAGAGTTCTTGTTGGTGGTAGTAACCCTCATCGTGCTTATAATTTTGAAAATGTGTTATTTCCAACTGAACTTAGTCTTGAAGCTTTTTCGCCTACTTACCTCGAACCTATCTTTGCAAATATTCGTCCGAGGATTGTGTCTCCTACTCCAGCACAAAAATACGGTCAAAAGTTGGAGGTTCAATTCGAGGTGCAAGCAGCATTGGATCTTAATGCAGTACAAGTTACATTGTTGGCGCCGCCGTTTAATACACACTCATTCTCCATGAATCAAAGATTGTTGGTGTTGGAGTCAGGCAAAGTGGCTAATGTGGAAAAAAACAAGTATGCAATTGAAGTTACAATTCCCGGTTCACCCATTCTTGCACCTCCTGGTTTTTATATACTATTTGTGGTTCATAAAGAAATTCCAAGTGAAGGTGTTTGGGTGCAAATTCATTGA 1620 0.4364 MTTTYLLFLLPILIATIITSPVAAAGGQWRVLQKSIGVVAMHMQLLHNDRIAIFDRTDFGLSKLPLPNGKCRHDPRETTVRNDCTAHSVEYDVKSNTFRALFVETDVWCSSGSVNPVGTLIQTGGFNDGDRNVRIFEPCNGCDWREIQGELGARRWYATNHALPDGRQIIIGGRQQFNYEFYPKNGGANVINLPFLAQTNEPGAENNLYPFVFLNVDGNLFIFANNRAILFDYTKNAVVRQFPQIPGGEPRSYPSTGSAVLLPLNLQARNLEAEVLICGGAPKGAFQKVAKNEFVGALNTCARIKITDPNPRWVLEKMPGARLMGDMITLPNGEVLIINGAAAGAAGWETGRNPVLNPVIYKPNNPIGARFESQNPSNTPRMYHSTAILLRDGRVLVGGSNPHRAYNFENVLFPTELSLEAFSPTYLEPIFANIRPRIVSPTPAQKYGQKLEVQFEVQAALDLNAVQVTLLAPPFNTHSFSMNQRLLVLESGKVANVEKNKYAIEVTIPGSPILAPPGFYILFVVHKEIPSEGVWVQIH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3841 539 CDD E_set_GO_C 430 538 IPR015202 -
Tpr1g3841 539 Pfam Glyoxal oxidase N-terminus 41 280 IPR009880 -
Tpr1g3841 539 Pfam Galactose oxidase-like, Early set domain 435 538 IPR015202 -
Tpr1g3841 539 Gene3D - 23 429 IPR037293 -
Tpr1g3841 539 SUPERFAMILY Galactose oxidase, central domain 89 428 IPR011043 -
Tpr1g3841 539 Gene3D Immunoglobulins 434 539 IPR013783 -
Tpr1g3841 539 PANTHER SECRETED PROTEIN-RELATED 20 538 - -
Tpr1g3841 539 SUPERFAMILY E set domains 431 538 IPR014756 -
Tpr1g3841 539 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 20 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3841 Tpr-Chr1 42444230 42447007 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3841 1 42444230 42447007 Tpr1g3841 1 42444230 42447007 ECH
Tpr1g3841 1 42444230 42447007 Tpr7g0252 7 2056540 2059019 PCT