Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3837 ATGAACACAATTCGATCTCGTTGGTTAACAAAAATGGCGGCAGAAAACACTGGAAAAAACAGCCTCGAATCTCACGGTTTCTGGCCATTTCTCCGCCGTTGGATCCCTACTTCCACCGACCACATCATCAATGCCGAGAAACGCCTTCTTTCTCTTGTCAAGACTCCGTATGTTCAAGAACAGGTGAATATAGGATCTGGTCCACCAGATTCAAGAGTGAGATGGTTTCGTTCATCTAGTAATGAACCGCGGTTTATTAACACCGTTACTTTCGACAGTAAAGATGATTCGCCTACGCTTGTAATGGTTCATGGATATGCTGCATCACAAGGTTTCTTCTATCGCAATTTTGATGCTCTTGCTTCGCGTTTTAGAGTTGTTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGACTTTACATGCAAAAGCACTGAAGAAACCGAGGATTGGTTCATTGATTCTTTTGAGGAATGGAGGAAAGCCAAAAACATAAGTAAATTTATACTTCTTGGGCATTCTTTTGGTGGTTATATTGCTTCCAAATATGCGCTTAAGCACCCAGAGCGTGTACAACACTTGGTTTTGGTGGGATCTGCTGGATTTTCGTCAGAAACAGAGAGGATTACAAAGTTCTTATCAACATGGAAGGGATCAATCCTGAACCAAATATGGGAATCCAATTTCACACCTCAGACAATTATCAGAGGTTTAGGTCCTTGGGGTCCTGATCTAGTCGCCAGGTATACAAGTGCTAGGTTTATCCAATACTCAACTGGGGAACTGCTGACAGAATCTGAATCGAAGTTACTAACAGATTATGTTTATCACACGTTAGCAGCCAAAGCTAGCGGTGAGCTGTGCTTAAAATATATTTTTTCATTCGGAGCATTTGCCAAGTCGCCTCTTCTACACAGTGCCTCAGAGTGGAAAGTGCCCACCACTTTCATATATGGTTTCAACGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCCGGGTTCCACAGTCCGGGCATTTTGTGTTCATTGAAAACCCATCTGGCTTCCATTCAGCGGTATTTTATGCTTGTCGAAGGTTTCTTAGTCCTGATCCCGACAGTGAATCCCTTCCTGAAGGGCTAACATCTGCATAG 1173 0.4339 MNTIRSRWLTKMAAENTGKNSLESHGFWPFLRRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFYRNFDALASRFRVVAIDQLGWGGSSRPDFTCKSTEETEDWFIDSFEEWRKAKNISKFILLGHSFGGYIASKYALKHPERVQHLVLVGSAGFSSETERITKFLSTWKGSILNQIWESNFTPQTIIRGLGPWGPDLVARYTSARFIQYSTGELLTESESKLLTDYVYHTLAAKASGELCLKYIFSFGAFAKSPLLHSASEWKVPTTFIYGFNDWMNYEGAQEARKHMKVPCEIIRVPQSGHFVFIENPSGFHSAVFYACRRFLSPDPDSESLPEGLTSA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3837 390 PANTHER BNAA01G13630D PROTEIN 27 377 - -
Tpr1g3837 390 PANTHER RE40534P-RELATED 27 377 - -
Tpr1g3837 390 PRINTS Alpha/beta hydrolase fold signature 123 138 IPR000073 -
Tpr1g3837 390 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Tpr1g3837 390 PRINTS Alpha/beta hydrolase fold signature 186 199 IPR000073 -
Tpr1g3837 390 Gene3D alpha/beta hydrolase 84 371 IPR029058 -
Tpr1g3837 390 Pfam alpha/beta hydrolase fold 98 211 IPR000073 -
Tpr1g3837 390 SUPERFAMILY alpha/beta-Hydrolases 87 366 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3837 Tpr-Chr1 42392082 42396060 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3837 1 42392082 42396060 Tpr1g3837 1 42392082 42396060 ECH
Tpr1g3837 1 42392082 42396060 Tpr7g0254 7 2076732 2081373 PCT