Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3824 ATGGCTGATTTAGGTTCTTCAGCTTCTTCTAAGAGAATGTGGTGTTCAATTCCTGAAAAGTTTCAACTGCATGTGGCCATGTTGGCCTTGCAGTTTGGTTATGCTGGTTTCCATGTTGTCTCAAGAGCTGCCCTTAATATGGGAGTTAGCAAACTTGTTTTTCCTGTTTATAGGAACATCATTGCTCTGCTTCTCCTCCTTCCCTTTGCATATTTCTTGGAAAAGAAGGACAGACCACCAATTAATTTGAACTTCCTCATCCAGTTCTTTTTTCTAGCACTTATTGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTTGGACAACACATCCCCTACCTTTGCATCAGCAATACAGAACTCTGTCCCTGCCATTACATTTCTCATGGCAGTCATACTAAGGATAGAGCAAGTGAGACTGAATAGAAAAGATGGAATTGCTAAAGTAGCAGGAACAATATTTTGTGTAATTGGTGCAACAGTGATTACACTATACAAAGGTCCAACAATATATAGTCCAACTCCAAGTAATAACTTAAATTTTAGTAACACAACAATAATAACAGAAGTAACAACAACAATAACACCTATGATTGATTTTGGAACAATGTCATTGGGTGATGCAAAAGGAAAAAATTGGACACTTGGTTGTTTGTATCTGATTGGACATTGTTTGTCTTGGTCTGGTTGGCTTGTGTTCCAAGCACCTCTCCTTAAAAAGTACCCTGCTCGTCTCTCTGTTACTTCATATACATGTTTCTTTGGTCTCTTGCAATTTCTTCTTATTGCTTTGGTTTGTGAAAGAAATGCTCAAGCTTGGATTTTTCACTCTGGTGGAGAAGCTTTCACCATTTTATACGCGGGAGTTGTGGCATCTGGAATTGCTTTTGCAGTACAGATATGGTGTATTGATAGAGGAGGTCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAAACTTTTGTTGTTGCCATTATGGCTTCTCTTGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATAATTGGGGCAGTGTTGATAGTAGCTGGACTATACTTTGTATTGTGGGGTAAAAATGAAGAGAAGAAATTTGCAAAGGAACAGCTTGCAATTGCATCATCCACTACAGAACATAGCATCATTAGGCCCTCAAGCCATGCTAAAGCATCACTTACTCAACCATTCCTCTCTTCATCAACAGAAAATGTTTGA 1209 0.3921 MADLGSSASSKRMWCSIPEKFQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKDRPPINLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIAKVAGTIFCVIGATVITLYKGPTIYSPTPSNNLNFSNTTIITEVTTTITPMIDFGTMSLGDAKGKNWTLGCLYLIGHCLSWSGWLVFQAPLLKKYPARLSVTSYTCFFGLLQFLLIALVCERNAQAWIFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASLALGEEFYLGGIIGAVLIVAGLYFVLWGKNEEKKFAKEQLAIASSTTEHSIIRPSSHAKASLTQPFLSSSTENV* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3824 402 PANTHER WAT1-RELATED PROTEIN 15 379 IPR030184 GO:0016021|GO:0022857
Tpr1g3824 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
Tpr1g3824 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 261 359 - -
Tpr1g3824 402 PANTHER WAT1-RELATED PROTEIN 15 379 - -
Tpr1g3824 402 Pfam EamA-like transporter family 27 164 IPR000620 GO:0016020|GO:0016021
Tpr1g3824 402 Pfam EamA-like transporter family 216 354 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3824 Tpr-Chr1 42226077 42229127 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3824 1 42226077 42229127 Tpr1g3824 1 42226077 42229127 ECH
Tpr1g3824 1 42226077 42229127 Tpr7g0266 7 2193308 2197400 PCT