Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3822 ATGTCTTCACTCGTTTCACCACCACCTTCATTTCTCACTATTCCTTCACACAAAACTCATTTCTTCTGTTCCATTCATCACTTCCTCCCACTTCAACTTCCACCAAGGAACTTCAAATTCCAACACAAATGGAAAACACTAGAATGCAAAGTTACAACGAATTTAGATGCTCCACCGTCAACGTCAACGGCGTTAGCGAAAGAACCACACAAATACTTCGATCAGGTAGTTATAACCGTTCGTGGAGGAGACGGAGGTCACGGAGCAATATTGAATCAAAAACCTAAAAAAGAAGTTGAAAAAGGAAAAGGAAAAAAAGCGATTAATGATAATATTTACAAGAAAAGCGCGTTGAAGAGAGATTTTGATGGTTCTTTGATACTACCAATGGGAGGTCATGGTGGTGATGTTGTTATTTATGCAGATGAAAGTAAAGATACATTGTTAGAGTTTCATAATAAGAATCGATTTAATGCCAAACGCGGTGGAAATGTTGATGCAGTTGGCGTTTTTACTTCTTATTTGCGGAATGGAACTTCAGCACCTACTGTTCGTATTCCTGTTCCTCTAGGTACAGTTGTGAAAAGCAAACGGGGAAAGATGTTAGCTGATTTAGCACGACCTGGTGATGAAGTTCTTGTTGCGAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACGGAATAATAGGAAAAAAACGACGAGTTTGACAACTAATGTGATGAGAGATGACTCCGATAAGGTTTTAGTTCACGGTCAACCTGGAGAGGAGATTAAGTTGGAGTTGATCCTACGAGTTGTAGCTGACGTTGGTTTGATTGGACTTCCAAATGCCGGGAAATCAACACTTTTGGCAGCCATTACACTTGCAAAACCTGATATTGCCGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGATGGGGATCCCAACTTGGGAGCAGGGATGTATTCATCTGAGGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTGGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCATCTAAGGAGAACCCGTCTATTGGTCCATGTTGTTGATGCATCTACTGAAAACCCTGTAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCATACATTGTTGTTTTGAATAAGATTGACCTGCCAGAGGTTATAGATAGGCTTCCAACACTGACTCAAGAAATTCAAAGAATTGGCAGTGATGGTGCAGCTTCTGAACCAAAACCAAGCTCTGAAGTTTCTGCTCAATTATTGTCCGATGAAAGTGATACAAAGGAAAAAACACTTGAGGATTATCCACGACCTCACTCTGTTATTGGAGTTAGTGTTCTAAAGCGTATCAAGATTAAGGAGATGTTAAAGGAAATAAGGGCCGCTTTAAGGCAGTGTGTTGATTCTAGTGAGACATTGGCTTCCAGTGTGCCACTGCGAGATCTTGCAGTTCAACAAGGCTTAAGGCTTTCTAGCAAAAACTACACATAA 1542 0.4112 MSSLVSPPPSFLTIPSHKTHFFCSIHHFLPLQLPPRNFKFQHKWKTLECKVTTNLDAPPSTSTALAKEPHKYFDQVVITVRGGDGGHGAILNQKPKKEVEKGKGKKAINDNIYKKSALKRDFDGSLILPMGGHGGDVVIYADESKDTLLEFHNKNRFNAKRGGNVDAVGVFTSYLRNGTSAPTVRIPVPLGTVVKSKRGKMLADLARPGDEVLVARGGQGGISLLEMPRNNRKKTTSLTTNVMRDDSDKVLVHGQPGEEIKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDASTENPVNDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVIDRLPTLTQEIQRIGSDGAASEPKPSSEVSAQLLSDESDTKEKTLEDYPRPHSVIGVSVLKRIKIKEMLKEIRAALRQCVDSSETLASSVPLRDLAVQQGLRLSSKNYT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3822 513 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 46 489 - -
Tpr1g3822 513 TIGRFAM small_GTP: small GTP-binding protein domain 271 414 IPR005225 GO:0005525
Tpr1g3822 513 MobiDBLite consensus disorder prediction 419 451 - -
Tpr1g3822 513 CDD Obg 270 416 IPR031167 GO:0005525
Tpr1g3822 513 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 270 481 IPR031167 GO:0005525
Tpr1g3822 513 ProSiteProfiles Obg domain profile. 70 269 IPR006169 -
Tpr1g3822 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 481 IPR027417 -
Tpr1g3822 513 PRINTS GTP1/OBG GTP-binding protein family signature 272 292 IPR006073 GO:0005525
Tpr1g3822 513 PRINTS GTP1/OBG GTP-binding protein family signature 293 311 IPR006073 GO:0005525
Tpr1g3822 513 PRINTS GTP1/OBG GTP-binding protein family signature 328 343 IPR006073 GO:0005525
Tpr1g3822 513 PRINTS GTP1/OBG GTP-binding protein family signature 345 363 IPR006073 GO:0005525
Tpr1g3822 513 Pfam 50S ribosome-binding GTPase 271 398 IPR006073 GO:0005525
Tpr1g3822 513 Gene3D GTP1/OBG domain 71 268 IPR036726 -
Tpr1g3822 513 ProSitePatterns GTP1/OBG family signature. 330 343 IPR006074 GO:0005525
Tpr1g3822 513 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 46 489 IPR045086 GO:0003924|GO:0005525
Tpr1g3822 513 Pfam GTP1/OBG 131 267 IPR006169 -
Tpr1g3822 513 Gene3D - 269 488 IPR027417 -
Tpr1g3822 513 SUPERFAMILY Obg GTP-binding protein N-terminal domain 72 237 IPR036726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3822 Tpr-Chr1 42202071 42207491 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3822 1 42202071 42207491 Tpr1g3822 1 42202071 42207491 ECH