Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3817 ATGGAAACCAACTCAGTTTCCAAGCTTCTTCTTTCACTATTCTTCACTATCTTCTTTCTTGGTTCTGAGTTTATTCAATGTAGTGTTACATATGATAGAAAAGCTATTCTCATCAATGGACAAAGAAGAATACTCATCTCTGGTTCCATTCATTATCCAAGAAGCACCCCAGAAATGTGGGAGGATCTGATTCAGAAAGCTAAAGATGGAGGGTTAGATGTTATTGACACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTAGTAATTACAATTTTGAAGGAAGGTACGATCTAGTACATTTCATAAAGACAGTGCAGAAAGTGGGTCTGTATGTACATCTTAGAATTGGACCTTATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGAATCAGTTTCAGAACTGATAATGGCCCTTTTAAGGCTGCAATGGAAGGTTTTACTCAAAAGATTGTTCAGATGATGAAGAATGAAAAGCTATTTCAGTCACAAGGTGGTCCAATAATTCTTTCTCAAATTGAGAATGAGTATGGCCCACAAGGAAGAGCACTTGGAGCTTCTGGTCATGCATATTCAAATTGGGCTGCAAAAATGGCTGTTGGATTAGGTACAGGTGTCCCTTGGGTGATGTGTAAGGAAGATGATGCCCCAGATCCAGTGATAAATGCTTGCAATGGTTTTTACTGCGATGATTTCATTCCCAATAAACCATACAAGCCTAAACTATGGACTGAGTCTTGGAGTGGCTGGTTTTCAGAATTTGGCGGACCAGTTCCCCAGCGACCGGTTCAGGATTTAGCGTTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCTCTTTTTAATTATTACATGTACCACGGAGGAACTAATTTTGGACGATCAGCTGGAGGACCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGTTAAGAGAACCTAAATATGGTCATTTGAAAGACCTTCATAAAGCTATCAAGCAATGTGAACATGCTTTGGTTTCTTCAGATCCTAAGGTTACATCATTAGGAGCATATGAACAGGCATATGTATTCTCTACAAGAACAACATGTGCAGCTTTTCTAGCTAACTATCATTCAAATTCTGCTGCAAAAGTGACCTTCAACAATAGGCACTATGACTTGCCTGCTTGGTCCATAAGCATCCTCCCTGATTGTAGAACAGATGTTTTCAACACTGCAAGAGTGAGGTTTCAACCTTCACAAATACAAATGTTGCCTAGTAATTCTAAATTGTTCTCATGGGAGACCTATGATGAAGATGTGTCTTCGCTTGCGGAAAATTCCAAAATCACAGCTTCTGGACTTCTAGAACAGCTAAGTGCTACTAGAGACACTAGTGATTATCTATGGTACATAACCAGTATTGACATAAGTCCATCGGAATCATTTCTTCGCGGAAGGAACAAGCCTAGCATTAGTGTGCACTCCTCTGGCGATGCCGTCCATGTGTTTATCAATGGGAAATTTTCAGGCTCGGCTTTTGGGACAAAGGAACATCCAAGTTTCAATTTTAATGGACCTATTGACCTACGAGCTGGAACTAATAAAATAGCACTTCTAAGTGTAGCTGTTGGATTACCTAACGGTGGAATCCATTTTGAGTCATGGAAGACAGGAATCACAGGTCCAGTTTTGCTCCATGGTCTTGACCGTGGACAGAAAGATTTGACAGGGCAAAAATGGTCATACCAGGTTGGCCTAAAAGGAGAAGCTGTGAATTTGGTGTCTCCCAATGGTGTCTCATCTGTTGATTGGGTGCGAACGTCACAAGCTTCTCAAAATCAGCCACAGTTGAAATGGCACAAGGCTTATTTCAATGCACCTAATGGAATTGAACCATTGGCATTGGACATGAGCAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATTGGAAGATATTGGATGGTTTATGCAAAGGGTAACTGTAATGGTTGTAACTATGCCGGAACATATCGTCAGGCCAAGTGTCAAATTGGTTGCGGACAACCTACCCAACGATGGTACCATGTTCCAAGGTCCTGGTTAAAGCCAACAAATAACTTGCTGGTCGTTTTCGAGGAATTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGGATAGTGCATACTCCACGAGTTAGTGAATCAAATTTAATGACTAATACAACACAAGAATGA 2238 0.4062 METNSVSKLLLSLFFTIFFLGSEFIQCSVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPSNYNFEGRYDLVHFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMEGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPQGRALGASGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDDFIPNKPYKPKLWTESWSGWFSEFGGPVPQRPVQDLAFAVARFIQKGGSLFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPKVTSLGAYEQAYVFSTRTTCAAFLANYHSNSAAKVTFNNRHYDLPAWSISILPDCRTDVFNTARVRFQPSQIQMLPSNSKLFSWETYDEDVSSLAENSKITASGLLEQLSATRDTSDYLWYITSIDISPSESFLRGRNKPSISVHSSGDAVHVFINGKFSGSAFGTKEHPSFNFNGPIDLRAGTNKIALLSVAVGLPNGGIHFESWKTGITGPVLLHGLDRGQKDLTGQKWSYQVGLKGEAVNLVSPNGVSSVDWVRTSQASQNQPQLKWHKAYFNAPNGIEPLALDMSSMGKGQVWINGQSIGRYWMVYAKGNCNGCNYAGTYRQAKCQIGCGQPTQRWYHVPRSWLKPTNNLLVVFEELGGNPWKISLVKRIVHTPRVSESNLMTNTTQE* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3817 745 Pfam Beta-sandwich domain in beta galactosidase 348 418 IPR041392 -
Tpr1g3817 745 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Tpr1g3817 745 PANTHER BETA-GALACTOSIDASE RELATED 3 733 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 Gene3D - 442 584 - -
Tpr1g3817 745 Gene3D - 593 732 - -
Tpr1g3817 745 Gene3D Glycosidases 22 344 - -
Tpr1g3817 745 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Tpr1g3817 745 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Tpr1g3817 745 PANTHER BETA-GALACTOSIDASE 3 733 - -
Tpr1g3817 745 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
Tpr1g3817 745 SUPERFAMILY Galactose-binding domain-like 583 732 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3817 Tpr-Chr1 42175684 42180902 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3817 1 42175684 42180902 Tpr7g0273 7 2227539 2232922 PCT