Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3809 ATGTCTTTCAACAAAGTCATTCTGCTTGTAACAGCTTTTCTCTCGGTTACACTTTCTCAAGCTCACCCTGCAGGCTTCAACTTTGGATGGGGTGGTTATCATGGTGGAAGAACTAGAGGAATGTCTTTTGGTCTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTAATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAATAGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGTTTCGTCCAGGGTTGCGACGCGTCAATTTTGTTGGATGATAGTGCGACAATAGTCAGTGAAAAAAATGGTGGACCTAACAAAAATTCTGTCCGAGGTTATGATGTGATTGATGAGATCAAATCTAAGTTGGAACAAGCATGTCCTCGGACAGTCTCGTGTGCAGACATTGTTGCCCTTGCTGCTAGAGGATCCACTGTTCTTAGTGGAGGACCCAATTGGGAGCTACCATTGGGACGGAGAGACTCAAAAACTGCAAGCCTAAGGGGCTCGAACAAAAACATTCCCCCACCAAATGCCACCATTGAAGGTCTCTTAACATTTTTCAAGCGTCAAGGTCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGAGCACATACAATTGGTGTAGCAAGATGTGCAACATTCAAGCAAAGATTATACAACCAAAATGGAAACAACCAACCAGATGAGAATCTAGAAAAAACATTTTACTTTGGTTTGAAAACAATGTGTCCAAAATCAGGTGGTGACAACATAATTTCTCCCTTGGACTTTGGTTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTAGAGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACAGGGAATGTTAAGGAAACTCATGAATTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTGAGCAATTTGCCTTGTCTATGATCAAGTTGGGAAATCTTCGTCCTCTCACTGGATTTAACGGTGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA 1041 0.4131 MSFNKVILLVTAFLSVTLSQAHPAGFNFGWGGYHGGRTRGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRIAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNGGPNKNSVRGYDVIDEIKSKLEQACPRTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLTFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQNGNNQPDENLEKTFYFGLKTMCPKSGGDNIISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLLTGNVKETHELVKKYAQDESLFFEQFALSMIKLGNLRPLTGFNGEVRKNCRRVN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3809 346 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 Pfam Peroxidase 63 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 SUPERFAMILY Heme-dependent peroxidases 44 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 ProSiteProfiles Plant heme peroxidase family profile. 44 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PANTHER PEROXIDASE 35 345 - -
Tpr1g3809 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Tpr1g3809 346 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Tpr1g3809 346 Gene3D Peroxidase, domain 2 182 326 - -
Tpr1g3809 346 Gene3D - 49 346 - -
Tpr1g3809 346 PANTHER PEROXIDASE 72-RELATED 35 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 CDD secretory_peroxidase 44 345 IPR033905 GO:0004601|GO:0042744
Tpr1g3809 346 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g3809 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3809 Tpr-Chr1 42105639 42108615 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3809 1 42105639 42108615 Tpr1g3809 1 42105639 42108615 ECH