Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3801 ATGTATGCAGTTAACATGGGTGCAGCTTGTTGTGTTGCTGCAAAGGATCGTAGTATTACTAACAGAACTGGAGGTGAAAGTTTGCATAGGGATGTCACACGTTCACCGTCATGGAGCTTTCGGTGGGATAGTCTGGGGCGTGTTGCTGATGAAGTTCAGAATCCTTCCTATTCCACGTCTCATGTATTCAGCAGAAATACCAGCATGGAGTTTAAAGGCTCGCTAAGTTCTGAAAGAGGTAATTTATCTGATGGGGGAAGCATGCTGGACAATTCCGCAACTATTTCGCTGAAGTCCCCTGTTAGCGAGGCATTGGCTGCAAACATAATGACACCATCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGGGAAGAATCCAGGAGAATCTTCAATACCAAATCATTCATTTTCAATACCTTCAGTTTTCTCAACACCTATAGCAGGTCCTTTATCTAATCATGGTTATCAACATCTTCCCAATTCTACCCCAACAAGATCTGCACATCGATCTCTGGGACACCCACTGTTGAGACAGATTTCTGATAATCAGATCATGGGTCTAAAATCACCAGACAGCTCAATTTATGAAGGAAGGGTATCATTTGTACTCTCCACTTGCAGCAATGAAATTGAAGCTATATCCCAATGTGGATCGTCTGATGGTTGGTCGATGCACACCTTTTCTGAGCTGGTTGCCTCCTCGCAAAGGGGAAGGTGGTCTTTTGACAGCGAGTGTTTTGGCTCGGGTCGTCGCAAGATAAGTGGATCCAGCAGCAGGCTGTCATATTCACCTTCCATGGATCTACAATCTTGTGGGACGTGCACAAGGCTTTTGTCTGATAAATCAGCATGGGGCAACCACAAATTTATTGGCAACAGTGACCTCTCAGTTGTTGCCGTACTAATATGTGGTCATGCATTTCATGCAGATTGCTTAGAGACTATGACTGCAGAGGCAGATAAGTATGATCCATCGTGTCCAATTTGTATGGCTGGCGGCGATAAGCACTTTCTAAAGTTGTCAAGAAAAGGTTTTCGAGCTGAAGCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAATCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATATTGAATTGGGAGGAAATGTTTCAAAGATGGAGGCTAGCTCCAGTACAAGGAGCTCAGTTGGAAAGCCCTTCTTGAAGAAGCATTTTTCACTTGGGTCAAAGTGGAACCGATCTCTGTCTGAGAATGATTGTGCAAGGAAGAAAGGCTTTTGGGCAAGATATAAAAAAGATTGA 1323 0.4361 MYAVNMGAACCVAAKDRSITNRTGGESLHRDVTRSPSWSFRWDSLGRVADEVQNPSYSTSHVFSRNTSMEFKGSLSSERGNLSDGGSMLDNSATISLKSPVSEALAANIMTPSSDLSMSSNFSTVGKNPGESSIPNHSFSIPSVFSTPIAGPLSNHGYQHLPNSTPTRSAHRSLGHPLLRQISDNQIMGLKSPDSSIYEGRVSFVLSTCSNEIEAISQCGSSDGWSMHTFSELVASSQRGRWSFDSECFGSGRRKISGSSSRLSYSPSMDLQSCGTCTRLLSDKSAWGNHKFIGNSDLSVVAVLICGHAFHADCLETMTAEADKYDPSCPICMAGGDKHFLKLSRKGFRAEAEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIELGGNVSKMEASSSTRSSVGKPFLKKHFSLGSKWNRSLSENDCARKKGFWARYKKD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3801 440 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 6 434 - -
Tpr1g3801 440 ProSiteProfiles Zinc finger RING-type profile. 274 332 IPR001841 -
Tpr1g3801 440 PANTHER EXPRESSED PROTEIN 6 434 - -
Tpr1g3801 440 SUPERFAMILY RING/U-box 273 334 - -
Tpr1g3801 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 334 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3801 Tpr-Chr1 42053978 42058167 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3801 1 42053978 42058167 Tpr1g3801 1 42053978 42058167 ECH