Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3800 ATGATGGCTACATCTAGTGGAAACTCTAGTGTGTCAACAAAATCTCAAAGCTATGGATCTGAGGAAGATTTGCAAGTTCTTATGGATCAAAGAAAGAGGAAGAGAAAGCAATCGAACCGCGAATCGGCAAGACGATCAAGGATGAGGAAGCAGAAACACATGGATGATTTAATGGTTGAGGTGGAAAGACTAAGAAATGAAAACAATGAAATCATGACAAGGATGAACATGACAACACAACACTACCTTAAAATTGAGGCAGAGAATTGTGTTCTAAGTGCACAAATGGTTGAACTTAATCAAAGGTTACAATCATTGAATGATATCATCAACATCATCAACACACCTACTACTATTACTAATGGAGTTAATTATCAAAATAATGATTGTTTTTTAACAATTTCAGATAATTGCTTCATGAATCAAATGAATATGTCTTATCTTAATCAACAACCAATTATGGCCTCAGCAGACATGTTTATGTGGTGA 489 0.3476 MMATSSGNSSVSTKSQSYGSEEDLQVLMDQRKRKRKQSNRESARRSRMRKQKHMDDLMVEVERLRNENNEIMTRMNMTTQHYLKIEAENCVLSAQMVELNQRLQSLNDIINIINTPTTITNGVNYQNNDCFLTISDNCFMNQMNMSYLNQQPIMASADMFMW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3800 162 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Tpr1g3800 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Tpr1g3800 162 PANTHER BZIP TRANSCRIPTION FACTOR 2 160 - -
Tpr1g3800 162 Gene3D - 29 84 - -
Tpr1g3800 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 2 160 - -
Tpr1g3800 162 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Tpr1g3800 162 MobiDBLite consensus disorder prediction 1 23 - -
Tpr1g3800 162 MobiDBLite consensus disorder prediction 1 55 - -
Tpr1g3800 162 Coils Coil 47 74 - -
Tpr1g3800 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Tpr1g3800 162 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Tpr1g3800 162 Pfam bZIP transcription factor 31 86 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3800 Tpr-Chr1 42048811 42050224 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g3800 bZIP_1 4.9e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3800 1 42048811 42050224 Tpr1g3800 1 42048811 42050224 ECH