Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3799 ATGGGTTCTCTGCAAGGACAAGTTATGTGTCCCTCTGTTCATCCCAAAGTTGCAGGGTTCTGTAGCCTTCCTATGATTGGGCCAATGAATGCTAGCTGTGTTAGACCTGAGTTTTGGGGACTCAAGGAACTTAGTGGCAGCGGCAAGACTAGGACGGGTTTCCTTTCTTGGCACATAAACACGCGAAAAAGCAAGACAATAGTGCATTGTAGTTTAAATCCGTCCTCGAATGATGGCGGAAGTACGGCAGAAAATTTCGATGAAAAAGATGAAGATTATGTTAGGTCAAGTGTGATTGAAGCTGTTGAGGTGAAGAGTGGAGCAGATGGTTTCATTATCAAAATGAGGGACGGAAAACACTTGAGATGCGTCCAAAACAATCCTCAGGGAGGCCATCTACCAGATTATTCACCACATCCCGCTATTGTTTTGAAGATGGAAGATGGTCTACTTCTCCCTATAATTGTTTCGGAGATGCCAAGCGTCTTACTAATGGCAGCAGTGCGCAATGTTCAAATTGCTAGACCTACTTTATATGAAGTAGTGATGGAGATGATTGAAAAGATGGATTACCAAGTTAGACTTGTCAGAGTGACTAGGAGAGTCGATGATGCATACTTTGCCCAGTTGTATCTTACCAAGGTTGGAAAAGAGGCAGAATGTAGGAGCTTTGACCTTCGACCTTCAGATGCTATCAATATTGCAATTAGATGCAAGGTGCCAATACAAGTCAACAAGTACTTGGCGCACAGTGATGGAATGAGAGTAATTGAATCAGGCAAAGTGTCAATACAGTTCCCTGGTTTTGATGGCCGGTTATTGACAGAAATGGACAAGCCAAACGGTCAGCCTTGTGCTGAAACCGATGAATTCAATCTTTTGAACAACATGTTGAAAGCTGTTGGTGAAGAGCGTTACAGTGATGCTGCGTTATGGAGGGACAAACTTAATCAACATAGGGCTGGTAAAAACGTCAAGAAAAGATCCTGA 990 0.4313 MGSLQGQVMCPSVHPKVAGFCSLPMIGPMNASCVRPEFWGLKELSGSGKTRTGFLSWHINTRKSKTIVHCSLNPSSNDGGSTAENFDEKDEDYVRSSVIEAVEVKSGADGFIIKMRDGKHLRCVQNNPQGGHLPDYSPHPAIVLKMEDGLLLPIIVSEMPSVLLMAAVRNVQIARPTLYEVVMEMIEKMDYQVRLVRVTRRVDDAYFAQLYLTKVGKEAECRSFDLRPSDAINIAIRCKVPIQVNKYLAHSDGMRVIESGKVSIQFPGFDGRLLTEMDKPNGQPCAETDEFNLLNNMLKAVGEERYSDAALWRDKLNQHRAGKNVKKRS* 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3799 329 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 327 - -
Tpr1g3799 329 Gene3D Bifunctional nuclease domain 120 262 IPR036104 GO:0004518
Tpr1g3799 329 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 123 256 IPR003729 GO:0004518
Tpr1g3799 329 PANTHER VON HIPPEL-LINDAU PROTEIN 1 327 - -
Tpr1g3799 329 SUPERFAMILY Hypothetical protein TM0160 123 260 IPR036104 GO:0004518
Tpr1g3799 329 Pfam Bifunctional nuclease domain 142 253 IPR003729 GO:0004518
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g3799 Tpr-Chr1 42035370 42039626 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3799 1 42035370 42039626 Tpr1g3799 1 42035370 42039626 ECH