Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3794 ATGGAAACTGTAGTGGAAGTCCTTCGCATGAACAAAGGAGCCGGCAAAACTAGCTATGCCATGAACTCCTCCGTCCAGAGGAAGGTAATATCATCAACAAAACAAGCAGTAGAGAAAGCTATTAAGGAAATTCTATGCTCACAAAGAGGGCCAATAATGAAGATGGGAATTGCTGACTTAGGTTGCTCATCAGGGCCTAATGCCTTAATGGTAATTTCAGAAATAGTTGAAGCTATAAATGCAACCTCAAGCTTGTTGAATCATCCAGCACCAAAGGAACTAATGTTTTATATGAATGATCTTTTCACCAATGATTTCAACAACATTTTTGCTTCCTTGCCATCTTTTCACAAAAAAATTAGGCAAGAAAAGGAAAATAATCAAAGTAAAAATAATAATTATAATAATAATAATAATAATATCAGGAATTTTGGTTCTACTTGTTTTGTTTCTGCTGTTCCGGGCACTTTCTACGGTAGACTTTTCCCAACTAAATCCATCAACTTTTTTCACTCTTCTTCAAGCCTCACGTGGCTTTCTCGGGTTCCTAATGGTTTGAAGGATGAAAGTGAGAGGAGATTGAACAAGGGAAAACTCTACATATCAAAGAGCACTCCCAATTATGTGATGGAAGCTTATTCACAACAATTTCAAAATGATTTTTCATGTTTCCTTGAGTCACGATCTCTAGAGTTGATAGATGGGGGACGCATGGTCCTAACTTTTATGGGTAGAGAATCCATGGACCCAGCAGCACCCTATGGTGGCTACCATTGGGAACTTTTAGCACAAGCCCTTATGACCATGGTTTCAGAGGGTCTTGTTGAAGAAGAAAAAGTGGATTCTTTTAACGCACCTTACTATGCATGTTGTTATGAAGAATTGAAAATGGTGATTGAAAAGGAAGGATCATTCTCGGTGGATTCCTTTGAAACTTATGAAATTGATTGGGATGAAGGGATTGAATCAGAAAAAGGAGAAGGTTTTGCAAGGCTCATAAGGGCTGGTTATGAGTCCCTACTAGAATATCATTTTGGGAGTCATATATTGGACGACTTGTTTGGAAGGTATGCTCAACTTGTGGACCACCATTTCTCCAAAACTAAGCCTAAATTTTTGGCTTTCAACATTTCTCTAGTCAAGTGA 1146 0.3813 METVVEVLRMNKGAGKTSYAMNSSVQRKVISSTKQAVEKAIKEILCSQRGPIMKMGIADLGCSSGPNALMVISEIVEAINATSSLLNHPAPKELMFYMNDLFTNDFNNIFASLPSFHKKIRQEKENNQSKNNNYNNNNNNIRNFGSTCFVSAVPGTFYGRLFPTKSINFFHSSSSLTWLSRVPNGLKDESERRLNKGKLYISKSTPNYVMEAYSQQFQNDFSCFLESRSLELIDGGRMVLTFMGRESMDPAAPYGGYHWELLAQALMTMVSEGLVEEEKVDSFNAPYYACCYEELKMVIEKEGSFSVDSFETYEIDWDEGIESEKGEGFARLIRAGYESLLEYHFGSHILDDLFGRYAQLVDHHFSKTKPKFLAFNISLVK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3794 381 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 7 366 IPR005299 GO:0008168
Tpr1g3794 381 Pfam SAM dependent carboxyl methyltransferase 40 381 IPR005299 GO:0008168
Tpr1g3794 381 PANTHER JASMONATE O-METHYLTRANSFERASE 7 366 - -
Tpr1g3794 381 Gene3D - 7 368 IPR042086 -
Tpr1g3794 381 Coils Coil 117 140 - -
Tpr1g3794 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 381 IPR029063 -
Tpr1g3794 381 Gene3D Vaccinia Virus protein VP39 22 369 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3794 Tpr-Chr1 41984126 41996307 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3794 1 41984126 41996307 Tpr1g3794 1 41984126 41996307 ECH