Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3774 ATGGCTTCAAGTTCAGGTTGGACAACAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCTATCTATGACAAGGACACCCCGGATCGGTGGCAGAAGATTGCGAGGGCTGTCGGAGGGAAGACGGTTGAGGAAGTTAAAAGGCATTATGAGATGCTAGTTGAAGATTTGAAGCAGATTGAACAAGGTCATGTTCCATTACCTAAATACAGAAATGCTCCAACAATAGGAGGTAGCATTAAAGGTTACACTTACAATGATGAAGAACAAAGGTTGAAGTTTCTAAGCCTTCAGTGA 294 0.4184 MASSSGWTTKQNKRFENALAIYDKDTPDRWQKIARAVGGKTVEEVKRHYEMLVEDLKQIEQGHVPLPKYRNAPTIGGSIKGYTYNDEEQRLKFLSLQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3774 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 97 - -
Tpr1g3774 97 CDD SANT 7 53 IPR001005 -
Tpr1g3774 97 Pfam Myb-like DNA-binding domain 7 52 IPR001005 -
Tpr1g3774 97 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Tpr1g3774 97 SMART sant 3 55 IPR001005 -
Tpr1g3774 97 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Tpr1g3774 97 Coils Coil 42 62 - -
Tpr1g3774 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 97 IPR044636 GO:0003700
Tpr1g3774 97 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
Tpr1g3774 97 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3774 Tpr-Chr1 41838141 41839315 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr1g3774 Myb_DNA-binding 1.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3774 1 41838141 41839315 Tpr1g3774 1 41838141 41839315 ECH
Tpr1g3774 1 41838141 41839315 Tpr7g0306 7 2485901 2486822 PCT