Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3773 ATGAAAATGAAGAGTGGAATAACTGTGTGTGTTGTTATGATGGTGTTGTTTTTGTTAGTTGAGTTGACAATGAGTTTGAGTTTAAGAGCTGAATGGTCGGCGTTATTGGAGCTTCGTTCGTCGTTGGGGATAAGGGGGAAAATTTGGCATAAAAAAGTCGATCCGTGTGGGAACTGGACAGGTGTTAAATGCAGGAATGATCGAGTTGTTGGTATCAACGTGTCCGGGTTGAAGAGAACCCGGTTGGGTAGTCTTAACCCGAGTTTTGAAGTGGATTCTCTTCAAAATTTCACTCTATTGGAGTCTTTCAATGCTTCTGGGTTCATGCTTAATGGGTCTATTCCTGACTGGTTTGGTGAGAAACTTGGTGCACTGCAGGTGCTGGATTTAAGTTCTTGTTCAATATCTAGTGTGATTCCTGATTCACTTGGGGGTATGAAAAGTTTGAAGATTTTGTTTCTTTCAGGGAATAATCTTACTAGTAGAGTGCCTTCAAGTTTGGGGTTGTTATCTAATCTCTCTATTCTTGATCTCTCTGGAAATATGTTTTCAGGATCAGTACCTGACAATTTCTCTAATCTTGGTAACCTTACAAGGCTTGATCTTTCTAATAATTACTTATCTGGGTCTATTCCACCTGAACTGGGTAGCCTTTCAAAGCTTCAAAATTTGAACCTTTCTAATAATGCTTTCACTGGTTCTGTTCCCTCTCAGTTAGGTAATCTTTCAAAGTTGGCTGAGCTTGATCTGCGTACGAATTCTTTTTCTGGGTTTTTACCTGATAGTTTGTGGTCAATGCCTAGTTTGCACTTTTTTGATGTATCAGGCAACAGTCTCACTGGTCCACTGCCAAAATTGTCTGGTTTAAGTGTTAGCTCAAATGGTGGCATATTCAATCTATCAAACAATTTGTTTTACGGATCTGTAAATGGTTCTACGAGCAAGATTCAAACAATTGATTTATCTGGTAATTATTTGGATGGTGTTGTGCAAGGTGGCGGCGGCGGTCTCAGTGATGTTACTCTATCGAGAAATTGCCTACAGAAGATTCCAAACCAGAGGAGTTTGGAAGATTGTAGAATGTTTTATCTCCAGAGAAATTTAACCTTTGCTAATGGTGACCATGAGTCCAAGAAAAACAATAAAAGAGTGATATTCATACTGGCAGGTATTTTTGGTGGGTTTGGCTTTATTGTGCTACTGGTATTGGTCCTAATATTGGTTCTGAAACAATGTCATAAAAGTAAAAATTTGGAAACTGAAAGAGGGACCACAAATGGGGGGCCTGTTACAGAAGGGGAAAGTCCTACACCTAAGGATCCTGTTTTTGTAACTGCTGTGGGTGAATCATTTACTTTTGAGCAAATACTCCATTTTACCGGGAATTTTGATGAAGCAAACTTAATCAAGCAAGGTCATTCTGGAGACTTTTTCTGGGGAGTTTTGGAAAATGGAGCAACTGTGGTTATCAAAAGGGTAGATTTAAGTTTATTCAAGAAAGAATCTTACATTGTAGAATTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGGTCCCAATTTTGGGACAATGCATGGACAATGAGAAGAATAAATGTATAGTTTACAAGTATATGATAAATGGAGATTTGGCTACTTCCTTACACAGAGTCAATGGTTCAGATGGTAAATTGCAGTCCATGGATTGGATCACAAGATTGAAAATTGCAGCAGGAGCTGCTGAAGGACTAGCTTACCTACATGATTGCAGCCCTCCTCTTGTTCACAGAGATATCCGAGCTAGTAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACAACACAAGGAGATTTTCATCAGAATGTCGTGTCAAGAGTTTTCAGCAAGCCACTATCTTCTAATCAAGGCAATCCCGGTAAATCATCTGTGACATGTGCCTATGATGTCTACTGTTTTGGAAAGATTTTAATCGAGCTTGTTACCGGTAATATTGACATCAGCAAATCAGATGATGCCACCACAAAGGATTGGTTAGAACAAACCTTGAATTACATCACCATATACGATAAAGAACGGTTGGGTAAGATTGTTGACCCGTCTTTGATAGTTGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATCGTGGCTAAGTCATGTCTGAATCCTAAACCTTCAAAACGTCCTCCAATGAAACATGTCCTCAAAGCACTTGAAAATCCATTGAAGATTGTCAGAGAAGAAAGTTTTAGCTCAGCAAAATTGAGAACAACTTCATCTAATAGATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGTTCATCAGATAGTGGTGCTACAATAAGGGAGGGTACTAGTAGTGGCAATAAACAAACAGGAAGATCAGGTTCTCATGGTAGCGGTGGTAATGATCACTCATCTTCCAATAAAAGGTCATCCAATGAAGTTTTCCCTGAACCATTGGGGATGCAAGACATGGAGAACGGAGAAGCAAGATGA 2511 0.3943 MKMKSGITVCVVMMVLFLLVELTMSLSLRAEWSALLELRSSLGIRGKIWHKKVDPCGNWTGVKCRNDRVVGINVSGLKRTRLGSLNPSFEVDSLQNFTLLESFNASGFMLNGSIPDWFGEKLGALQVLDLSSCSISSVIPDSLGGMKSLKILFLSGNNLTSRVPSSLGLLSNLSILDLSGNMFSGSVPDNFSNLGNLTRLDLSNNYLSGSIPPELGSLSKLQNLNLSNNAFTGSVPSQLGNLSKLAELDLRTNSFSGFLPDSLWSMPSLHFFDVSGNSLTGPLPKLSGLSVSSNGGIFNLSNNLFYGSVNGSTSKIQTIDLSGNYLDGVVQGGGGGLSDVTLSRNCLQKIPNQRSLEDCRMFYLQRNLTFANGDHESKKNNKRVIFILAGIFGGFGFIVLLVLVLILVLKQCHKSKNLETERGTTNGGPVTEGESPTPKDPVFVTAVGESFTFEQILHFTGNFDEANLIKQGHSGDFFWGVLENGATVVIKRVDLSLFKKESYIVELELLSKVSHARLVPILGQCMDNEKNKCIVYKYMINGDLATSLHRVNGSDGKLQSMDWITRLKIAAGAAEGLAYLHDCSPPLVHRDIRASSILLDDKFEVRLGSLSEVTTQGDFHQNVVSRVFSKPLSSNQGNPGKSSVTCAYDVYCFGKILIELVTGNIDISKSDDATTKDWLEQTLNYITIYDKERLGKIVDPSLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMKHVLKALENPLKIVREESFSSAKLRTTSSNRSWSTAFFGSWRHSSSDSGATIREGTSSGNKQTGRSGSHGSGGNDHSSSNKRSSNEVFPEPLGMQDMENGEAR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3773 836 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Tpr1g3773 836 Pfam Leucine rich repeat 125 182 IPR001611 GO:0005515
Tpr1g3773 836 PANTHER RECEPTOR-LIKE PROTEIN 55 265 794 - -
Tpr1g3773 836 PANTHER RECEPTOR-LIKE PROTEIN 55 9 266 - -
Tpr1g3773 836 Gene3D Ribonuclease Inhibitor 191 383 IPR032675 -
Tpr1g3773 836 ProSiteProfiles cAMP/cGMP binding motif profile. 468 521 IPR000595 -
Tpr1g3773 836 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Tpr1g3773 836 MobiDBLite consensus disorder prediction 781 836 - -
Tpr1g3773 836 Gene3D Phosphorylase Kinase; domain 1 434 538 - -
Tpr1g3773 836 SMART LRR_typ_2 242 265 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 122 145 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 194 217 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 146 169 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 218 241 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 170 193 IPR003591 -
Tpr1g3773 836 SMART LRR_typ_2 283 307 IPR003591 -
Tpr1g3773 836 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 9 266 - -
Tpr1g3773 836 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 265 794 - -
Tpr1g3773 836 Gene3D Transferase(Phosphotransferase) domain 1 539 762 - -
Tpr1g3773 836 ProSiteProfiles Protein kinase domain profile. 463 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3773 836 Pfam Leucine Rich Repeat 196 218 IPR001611 GO:0005515
Tpr1g3773 836 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Tpr1g3773 836 SUPERFAMILY Protein kinase-like (PK-like) 443 740 IPR011009 -
Tpr1g3773 836 SUPERFAMILY L domain-like 57 331 - -
Tpr1g3773 836 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Tpr1g3773 836 MobiDBLite consensus disorder prediction 781 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3773 Tpr-Chr1 41814063 41819060 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Tpr1g3773 PK_Tyr_Ser-Thr 7.4e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3773 1 41814063 41819060 Tpr1g3773 1 41814063 41819060 ECH