LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g3771	ATGCCTATCATAACTCGTCAAGCTAAAGGCCCAACTGGATTATGGGTAAAGATGACAGCTGTAACAATTTTGGGTCTATGTTTTATCTTTGTATGGACTGTGTTTTCTTCTTCATCTTCTTCTGTTACTTTTCAAAGGGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTTTTCCAATGCGAATAAACAAACACCACCACCCAAATCAGAAAAACGTGTGGAAGTATCTAAAGATCATAAATTTCATCAGAATGATGAGAATAAGGTTAATGGGTCATCTTTGAATTCTCCCACGCGCCCTCATAATAAAGAAGTGGCGCGTGAAAAGAAACGTGTGCATAAGAAGGAAGATAGTAAAGAGAATGTGAATCAGGTTCAAGGGTCATTGGAGAAAGAAGATGAAAGTGAAAAAGAATTGGAAGATAAAGAAAAAGAAGAAGAAGGATTGGAATTGGATCATGAGAGTGATGATTCAATTGAATCTGTTGATGGGGATTCTGAGATGTTAGAAGATGGAAATGGTGAAGAGTTGAAGAAAACTAGTAAGGGAAAAGTGAAAGGACCTTTGTTTGAGTCAAATGTTAACTATAGATGGAAAATGTGTAGTACTAGAAGCAAGCATAACTACATTCCTTGCATTGATATTGAAGTAGGCGGTGGAAAGGTTCCAGGTTACCGACATACGGAGAGGAGTTGTCCAAGGACATCCTTCATGTGTATGGTTCCTCTTCCCCTTGAAGGATATGAGTCTCCAGTGCCTTGGCCTGATAGCAAATTGAAGATATTGTATAAGAATGTTGCACACCCGAAACTAGCTGCATATATAAAAAAGCATCATTGGCTAGCGGATTCTGGAGAATATCTTACTTTCCCTCAAAATCAGTCTGTGTTTTTGGGAGGGGTTCAGCACTATCTTGAGTCCATTGAAGAGATGGTACCAGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTTGCAGCTGCTCTCCTTGATAAGGATGTTTTAACATTGTCACTTGGCTTGAAAGATGACCTAGTCGACTTAGCTCAGGTGGCACTCGAGCGTGGCTTCCCAGCCATGGTTAGCCCTTTTGGTAAAAGGAGGCTTCCTTTTCCAAGTCAAGTTTTTGATGTTATACATTGTGCGCGTTGTAGCATACCTTGGCATTCCAATGGAGGTAAGCTTTTACTCGAGATGAATCGGATTCTAAGACCTGGCGGATACTTTATTATGTCAACTAAACATGACAGGATTGAAGAAGAAGAAGCAATGACCGCACTGACAGCATCTATTTGTTGGAATGTTCTGGCACATAAAAGCGATGATGTTGGTGAAGTTGGAGTAAGAATATATCAAAAGCCTGAAGGAAATGACATATATGCATTGAGAAGGAAGAAGATCCCTCCGATTTGCAAAGAAAACGAAAATCCCGATGCAGTTTGGCATGTTCCAATCAAGACTTGTTTGCATACCATTCCAATTGGAATTGAACAACATGGGGCAGAGTGGCCTGAGGAATGGCCGAAGAGGATCGAAACTTATCCCGACTGGATGAACAATAAAGATAAATTGATCGCTGACACCAACCATTGGAATGCGATTGTTAACAAGTCATATCTCAATGGAATGGGCATTGACTGGACAAATATCAGGAATGTTATGGATATGAAATCCATCTATGGAGGATTGGCTGCAGCTCTATCTAAACATAACGTTTGGGTGATGAATGTAGTCCCTGTCCATGCACCAGACACTCTTCCCATAATTTTCGAACGTGGCTTTTTTGGTGTCTATCACGATTGGTGCGAGTCTTTCGGTACTTATCCAAGAACATATGACCTTCTTCATGCTGATCATTTGTTCTCACGACTCAAAAACAGGTGCAAGCAACCTGTGTCGATTGTTGTTGAGATGGACCGTATCTTACGGCCAGGAGGGTTGACAATCATACGCGACAAAGTTGAAATCCTAAATCCATTGGAAGAGATATTCAGAAGTCTGCATTGGGAGATCAGAATGACTTTCTACCAGGAAAAAGAGGGTATCATATGTGCACAAAAAACTACTTGGAGACCTTGA	2112	0.4048	MPIITRQAKGPTGLWVKMTAVTILGLCFIFVWTVFSSSSSSVTFQRESFEDISEPVSSFSNANKQTPPPKSEKRVEVSKDHKFHQNDENKVNGSSLNSPTRPHNKEVAREKKRVHKKEDSKENVNQVQGSLEKEDESEKELEDKEKEEEGLELDHESDDSIESVDGDSEMLEDGNGEELKKTSKGKVKGPLFESNVNYRWKMCSTRSKHNYIPCIDIEVGGGKVPGYRHTERSCPRTSFMCMVPLPLEGYESPVPWPDSKLKILYKNVAHPKLAAYIKKHHWLADSGEYLTFPQNQSVFLGGVQHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFAAALLDKDVLTLSLGLKDDLVDLAQVALERGFPAMVSPFGKRRLPFPSQVFDVIHCARCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDRIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYALRRKKIPPICKENENPDAVWHVPIKTCLHTIPIGIEQHGAEWPEEWPKRIETYPDWMNNKDKLIADTNHWNAIVNKSYLNGMGIDWTNIRNVMDMKSIYGGLAAALSKHNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNPLEEIFRSLHWEIRMTFYQEKEGIICAQKTTWRP*	704

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g3771	703	CDD	AdoMet_MTases	326	423	-	-
	Tpr1g3771	703	PANTHER	METHYLTRANSFERASE PMT28-RELATED	9	703	-	-
	Tpr1g3771	703	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	234	432	IPR029063	-
	Tpr1g3771	703	MobiDBLite	consensus disorder prediction	53	185	-	-
	Tpr1g3771	703	MobiDBLite	consensus disorder prediction	69	88	-	-
	Tpr1g3771	703	MobiDBLite	consensus disorder prediction	53	68	-	-
	Tpr1g3771	703	Gene3D	Vaccinia Virus protein VP39	303	466	IPR029063	-
	Tpr1g3771	703	MobiDBLite	consensus disorder prediction	103	151	-	-
	Tpr1g3771	703	Coils	Coil	124	154	-	-
	Tpr1g3771	703	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	9	703	IPR004159	GO:0008168
	Tpr1g3771	703	MobiDBLite	consensus disorder prediction	152	172	-	-
	Tpr1g3771	703	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	210	698	IPR004159	GO:0008168
	Tpr1g3771	703	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	557	685	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g3771	Tpr-Chr1	41794425	41801219	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr1g3771	1	41794425	41801219	Tpr1g3771	1	41794425	41801219	ECH