Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3765 ATGACAACAATTTTTGCTTCTGTCTCCGTGTTTCTTGTACTCTTCTTTCTCACATTCAACCTTGCAAATTCTGATCCATTCTTAGGAGTAAACTATGGACAACTCGCCGACAACCTTCCACCACCATCCGCCACCGCAAAATTACTCCAAACCACCGCATTCGAAAAAGTCCGATTATACGGAACCGATCCCGCCATAATCAAAGCACTAGCAAACACCGGAATCGGAATCGTAATCGGAGCCGCAAACGGCGACATTCCATCACTAGCTTCCGATCCCAATTTCGCCAAAACCTGGATTAACACCAACGTCATCCCTTTCTATCCCGCCAGCAACATCATCCTCATCACCGTCGGAAACGAAGTCATAACTTCAAATGACACGAATCTTATTAACGGAATGTTACCGGCGATTCAGAACGTGCAAAAAGCACTTGATGAAGCTTCTCTTGGTGGTAAAATTAGGGTTTCTACGGTTCATACTATGTCGGTTTTGTCGAATTCTGAACCTCCTTCTGCTGGAAGTTTTCATGATGAATATAGTGCCGTTTTGAAGGGTTTGTTGTCGTTTAATAAAGATACTGGTTCTCCTTTTGCTATTAACCCTTATCCTTATTTTGCTTACAAAAGTGATCCTGGAAGAGCTGATAATTTGGCTTTTTGTCTCTTTCAACCTAATGCCGGCCGAGTTGACGCCAACACCAAACTCAATTACATGAATATGTTTGATGCTCAGGTGGATGCTGTTCGATCTGCATTAGATTCTTTGGGTTTTAAGGATGTTGAGATTATGGTCGCAGAGACCGGGTGGCCCTACAAAGGAGATAATGACGAGGCTGGACCGAGTATTGAGAATGCAAAGGCGTACAACGGTAATCTGATTAAGCACCTACGATCCAAGGTTGGGACACCACTGATGCCAGGGAAATCAGTGGACACATACATCTTTGCTTTATATGATGAAGACTTGAAGCCTGGAGCTGGTTCTGAGAAAGCCTTTGGGCTTTACAACCCTGATCAATCGATGATCTATGACGCAGGTCTCTCTAAGCAACAAAGTACTACTCCTACCAGTAGCCCTGTAGCCGCCCCGATTAATGCGGATGTGTCAAAATCTCCTTTGAATTCGACTCCAAAAGTTCCAAGTCCAACAACACCGTATAATAGTAACATAGCATGGTGTGTGCCAAAAGCAGGATTAACTGATGTGCAACTACAAGCAAATTTGGATTATGCTTGTGGGCAGGGGATTGATTGTAGCTTAATTCAACCAGGTGGAGCTTGTTTCGAACCTAACACATTAGCAAACCATGCTGCATATGCCATGAATCTCTTTTATCACACTGTTGGGCAAAATCCATTAACTTGTGATTTCTCACAGACAGCTACACTAACATCAACTAACCCAAGTTATAATAGTTGTATTTATACTGGAGGGAATGCATAA 1446 0.4302 MTTIFASVSVFLVLFFLTFNLANSDPFLGVNYGQLADNLPPPSATAKLLQTTAFEKVRLYGTDPAIIKALANTGIGIVIGAANGDIPSLASDPNFAKTWINTNVIPFYPASNIILITVGNEVITSNDTNLINGMLPAIQNVQKALDEASLGGKIRVSTVHTMSVLSNSEPPSAGSFHDEYSAVLKGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDANTKLNYMNMFDAQVDAVRSALDSLGFKDVEIMVAETGWPYKGDNDEAGPSIENAKAYNGNLIKHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAGSEKAFGLYNPDQSMIYDAGLSKQQSTTPTSSPVAAPINADVSKSPLNSTPKVPSPTTPYNSNIAWCVPKAGLTDVQLQANLDYACGQGIDCSLIQPGGACFEPNTLANHAAYAMNLFYHTVGQNPLTCDFSQTATLTSTNPSYNSCIYTGGNA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3765 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 4 466 IPR044965 GO:0004553|GO:0005975
Tpr1g3765 481 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Tpr1g3765 481 Gene3D - 387 477 - -
Tpr1g3765 481 Pfam X8 domain 393 463 IPR012946 -
Tpr1g3765 481 Pfam Glycosyl hydrolases family 17 28 345 IPR000490 GO:0004553|GO:0005975
Tpr1g3765 481 SMART X8_cls 392 476 IPR012946 -
Tpr1g3765 481 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 4 466 - -
Tpr1g3765 481 Gene3D Glycosidases 27 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3765 Tpr-Chr1 41735376 41739440 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3765 1 41735376 41739440 Tpr1g3765 1 41735376 41739440 ECH