Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3763 ATGGCTCAAAACTCAACTTCCGATACTCGTCTCAACGCTAACTCTGCTTCTCCATTGCAGATCTCCAAAGATGTCCAAGGCTCTGACAATCCGATTCCACTTTCACCACAATGGCTTCTGTCAAAGCCAGGGGAGAATAAATCTGGAACAGGACCTATGGAAAACCATGTGATCTCAAATCCATCACATGGCAGTCGCTCAGAGACTGTTAAGATATCTGGTGATGGAGAGGATGCACAGAAGAGAAAGGACGTCTTTAGGCCATCTATGTTTGACTCAGAAAGTGGACGTCGTGATCGTTGGCGTGATGAAGAGAGAGACACTGAGAGAGACACCAAGTCCTCCTCCATACGTAAGGATCGTTGGAGGGATGGGGACAAAGACCTAGGTGATTCTCGGAAGGTGGATCGATGGGGAGAAAATCCAGCTCCAAAGAACTTAGGAGAACCACGTCGTGCTCCATCTGATAGTCATAGATGGAATGATTCAGGAAACCGGGAAGGTAACTTTGATCAGCGGCGTGAGAGCAAGTGGAACTCACGCTGGGGTCCTAATGATAAGGATCCCGAAGGTCTTCGTGAAAAATGGAGTGATTCAGGAAAAGATGGTGATATACATCTGGATAAAGGTTTGTCTCATGGGAAGGATGAGAAGGACGGAGATCACATTCGACCATGGAGGCCTAACTTTGCACAAAACCGTGGAAGGGTAGAGCCTCCTCATTCCCAAAGCACACCACCCCACAAACAAGGCTCTACATTTTCCTATGGCCGTGGTCGTGGGGAGAATACACCTCCACCAGTCTTCAGTCCTGGACACGGCCGTGGTGTCTCTGGTGGTAGCTCTTTGAATAGCACATATCCTGGAACTGCATTAGACAAAGTAGAGAGTGGACATGAAGAAAATTGCCCCTTCAGATATAACAGGACAAGGTTGCTTGATGTGTACAGAGTTACTAATATGGGCAGAAATAGAAAACTTGTTGATGATTTTGTGCAGGTTCCGAGTCTTACACAGGATGAACCATTGGAGCCTCTTGCTCTTATGACACCAAGTTCCGAGGAACTGTCTGTCTTAAATGGTATTGACAAAGGAGAGATAATTAGTAGTAGTGCACCTCAAGTGACGAAAGATGGAAGGGGTTCGACAGATTTTACTCATACTAGACGTATGAAGCCTGGAACCACTCCTCTTCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTTGCCGATGAGTTATCCAGTAATAGAGATCCCTCCTTTGAAGGAAATAGTTCTCTTCATTCTGGTGCTGCATGGCGAGCCAATAGCAGAGATGAACCTAGTGATGTTAGACTAAGGAAATCAGATGAGAGTTCACACCACCCAAAAGATACTCAAAGTCAATGGGAAAGTAAATTGGGTTTTGTATCTGAGTCCAAAGAAGTAGGTAAGTGGAGCGCTAGTGAAGATCCCGTTGTTAAAAGGCAGCTATCTGGTGCTTTGGAAAGTGAACTTGGAACCAGAAGAGTTCCTCCGACTGCTCCAGAGGAGTTATCTCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGCCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCATCTTGGTTTTCTCTTGGTGATGTCATGCCACATTTACGAGCTAAAGCCCGGCCACCACCAGGATTTTCTGCACCACAACCTGAATTGGCAGATATAACTGGCCGCCAAAATCCTGCTACATTTGGAAATGCTGTCACTGGCTTGAGTGAGGTTGAGATGTTGAAAAGTGATTCTAGACATTGGCAGGGTCCTGAAACCGGAGTTGAAAATAGGTATCTGGAGTCACTCATGTCTGGTAACAGGAGCAGTCCTACAATTAACAACCTGGCATTATCAGAAGGTTTTCAAGGGTTTGCTGGAAATAATTCTGGCAATCTGGGCCCATCGGGAATAGGCAATCTGGGCCCATCGGGAATAGATAGTGGAAACAACATTTACTTGCTTGCCAAGCGGATGGAACTTGAACGCCAGATGTCCTTACCCAATTCATATCCATATTGGCCAGGGCAGGATGCAGCATCCCTTGCTCCAAAATCAGATGTCCCAGATCTGCATTCAAAGCTCCTGTCTTCAGTGAGTGACAATTCGCGTCAACCACAGTCCCAAAGTTCTGAGTGGTTGTCGATAATCCAAGGATTATCTGACAGGACATCTGCAGGCATAAATAATGGCACTGCTGGATGGCCAAATAATCCCTTACAAGGTGGAATGGATCTCCTTCAGAATAAAATTGACCCACGACATGATCAGAATTTCCCTCAAATGCCATTTGGAATTCAACAACAAAGGCTGACACCACAAAATCAGTTGTCTTTAAGCAATTTATTGGCTCAAACTGCGGATAGCCCAGCCAGTTCTTTGACAGCAGAGAAGCTACTATCTTCCGGTTTATCACAAGATCCACAAATATTGAATCTGTTGCAACAGCAATACTTGTTGCAGTTGCATTCTCAAGCAGCTGCTTCAGCACCACAGCTGCCACTGTTAGATAAACTCCTGTTGCTGAAGCAGCAGCAGAAGCAGGAGGAGCAGCAGCTGCTCTTGCGGCAACAACAGCAACAACTGCTTTCCAAAATGTTGCAGGACCAACAGTCTACCCAGCTTTTTGGCAATTCATCTTATGGACAGTTGCAAAGTGCATTACCAATGGGAAATTTGCGTGTGGATCCTTCTCAACTTCAACCCCCACAAGAGATTTTTCCCATGAGCTCCCAGATGCCAATTCCTAGTGTACACAATGACCTTAGTACCGACTCTATGAATTTGCATCTTAAAGTCAGCCAAGACACAAGTTATACAGTTAACAGTAAAGCTTCAACTATGCGTCTGCCTCACCAGTTATTTGGGGATACTGTTCCTCAGAATAACTGGGCTCCTACTCTTGCTGAGCAAATTAATGAGAATAATAAAAAGGAAATTGCAGCTCCTCATGTTGAGAGTTCACTTGTGCCTGACCTGAACAGATCCAAAGAGGAACCCCACACTGTGCAGGATTCTGTTTTTGACCACAGTGCTAAGTCATTGGATCAGCTTCAGGACAGCGCCTTGAAACCTGACAATGGTGTGATACAAGCAATTTCTATGCCTTCTATACATTTACAGAGTGATGCACCTGCTGTTGATAAATCTTCAGTAGGATCTCGTGAGGTTGAGTTACCCCCAGCAAGTCGTGGTTCAGATGCGAAGATCAAATCAGATATTGCACATCAAGAGCAGCTGGCTGGAATAGACAGCTCCAATGCTGTGCATGTTGAAACACATGAACCCAAAAAGGCTACTGAGAAGAAATCTAAGAAGCAAAAATCTAGCAAACAATCTTCTGACCAATCAAAGGGATTGCTAAAAAACACAACTTTGCAGCCATCAAAGCGGTCAGAAGTTGAAATCCCAATTTATAATGAGTTGGGGGGAACAAACAAAGATCAGATTGAAGAAACTGATGCCCCGGAGACAGCTGAATATCATGAAACAGTCTTTGCGGACGATTCTAAGGCAGTTTTTTCTGTTTCTACACACAATGCCGAAGTTCCTGCTGGACGAGCTTGGAAACCGGCTCCAAGTGTCAAGGCAAAGTCTTTATTAGAAATTCAACAGGAAGAACAGAGAAAGGCACGGACAGAAACACTTGTATCTGATGTTACTTCTTCTGTCAATTCCATGAGTCTGTCAACGCCTTGGGCTGGGGTTGTGTCGTATCCAGACTCTGTTAAGGTATCTAGTGAAAGTCGCGGAGGAGACAATGCAGGAACACCTGTTAATTCTCAAATTTCTCAGAATCTGAAGAGCAAAAGAAGTCCGCTGCATGATCTATTAGCTGAAGAAGTTTTGAAGAAATCTAATGAAAAAGAAGTGGAGGTTCCAGATAGCACATTGGCTTCGCATGATATGGCCGTGCATTCAGAATCAATAGATGGTAGTAACTTCATTGAGGCAAAAGATACTAAAAGAAGTCGCAAGAAGTCAGGAAAATCAAAGGGTTCCGGAGTTAAAGCCCCAGTTCCAGTTACGTCTGCTGAAGTGACCATATCTTCAAGCCCAATTGAAAAAGGTAAAAGTTCCCGATCTGCACTACAGGAAAAAGAATTGCCTTCAATCCCTGCAGGACCCTCTCTGGGAGACTTTGTTCTTTGGAAAGGAGAGCGAGAGCAACCTAATGCTTCTCCTTCTCCGGCATGGTCTACTGATTCTGGTAGGGTTCCTAAACCGACTTCTTTAAGGGACATTCTAAAGGAGCAGGAGAAAAAAGTTTCTTCTGCAGTTCCTGCGAGCCCAGTGCCTACGCCTCAGAAATCCCAGCCTGCCCAAGCTAATTGGAGTAGTACTTCTTCACGGTCAATTTCAGCTTCATCTCCATCTAAAGCCGCCTCTCCACTTCCAATAAACTCCCATGCTTCAAATCAATCAAAATATAAAGGGGATGATGACTTGTTCTGGGGTCCAATTGAACCATCTAAGCAAGAAACTAAGCAATCAGATTTCCCTCAGCTGGCTAGCCAAGGAAGCTGGGGATCCAAAAATGTACCCGTGAAAGGTAACTCATCGGGATTATTAGCCCGGCAGAAATCAGCAAGTGGCAAACCAACTGACCGACCTCTATCATCATCACCTGCCTCTTCTCAATCGGCGCTGAAACTGAAAAATGATGCCATGACCAAGCATTCTGAGGCCATGGGCTTCAGAGATTGGTGTGAGAATGAGTGTGTCAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAGACGCTTCTTAAAGAAAACCTTGGATCATTTGACCCTGACCATCAATTCATTGATAAATTCCTCAATTACAAGGAGATGTTACCATCAGATGTGTTGGACATAGCTTTCCAGAGTAAGCATGGTAAGAAAGTTAACGGACTTGGCGCTGCTGCCATTGCATCAGCTAATGCAGATATACAGGATGTGGACCACACTGAAGGATCTTCCAAAGGAGGTGGAAAGAAGAAAGGCAAAAAGGGGAAAAAGGTTAGCCCTTTAGTTTTGGGATTTAATGTTGTGAGTAATCGGATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA 5208 0.4445 MAQNSTSDTRLNANSASPLQISKDVQGSDNPIPLSPQWLLSKPGENKSGTGPMENHVISNPSHGSRSETVKISGDGEDAQKRKDVFRPSMFDSESGRRDRWRDEERDTERDTKSSSIRKDRWRDGDKDLGDSRKVDRWGENPAPKNLGEPRRAPSDSHRWNDSGNREGNFDQRRESKWNSRWGPNDKDPEGLREKWSDSGKDGDIHLDKGLSHGKDEKDGDHIRPWRPNFAQNRGRVEPPHSQSTPPHKQGSTFSYGRGRGENTPPPVFSPGHGRGVSGGSSLNSTYPGTALDKVESGHEENCPFRYNRTRLLDVYRVTNMGRNRKLVDDFVQVPSLTQDEPLEPLALMTPSSEELSVLNGIDKGEIISSSAPQVTKDGRGSTDFTHTRRMKPGTTPLQDRGEDGGSYKVADELSSNRDPSFEGNSSLHSGAAWRANSRDEPSDVRLRKSDESSHHPKDTQSQWESKLGFVSESKEVGKWSASEDPVVKRQLSGALESELGTRRVPPTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSSWFSLGDVMPHLRAKARPPPGFSAPQPELADITGRQNPATFGNAVTGLSEVEMLKSDSRHWQGPETGVENRYLESLMSGNRSSPTINNLALSEGFQGFAGNNSGNLGPSGIGNLGPSGIDSGNNIYLLAKRMELERQMSLPNSYPYWPGQDAASLAPKSDVPDLHSKLLSSVSDNSRQPQSQSSEWLSIIQGLSDRTSAGINNGTAGWPNNPLQGGMDLLQNKIDPRHDQNFPQMPFGIQQQRLTPQNQLSLSNLLAQTADSPASSLTAEKLLSSGLSQDPQILNLLQQQYLLQLHSQAAASAPQLPLLDKLLLLKQQQKQEEQQLLLRQQQQQLLSKMLQDQQSTQLFGNSSYGQLQSALPMGNLRVDPSQLQPPQEIFPMSSQMPIPSVHNDLSTDSMNLHLKVSQDTSYTVNSKASTMRLPHQLFGDTVPQNNWAPTLAEQINENNKKEIAAPHVESSLVPDLNRSKEEPHTVQDSVFDHSAKSLDQLQDSALKPDNGVIQAISMPSIHLQSDAPAVDKSSVGSREVELPPASRGSDAKIKSDIAHQEQLAGIDSSNAVHVETHEPKKATEKKSKKQKSSKQSSDQSKGLLKNTTLQPSKRSEVEIPIYNELGGTNKDQIEETDAPETAEYHETVFADDSKAVFSVSTHNAEVPAGRAWKPAPSVKAKSLLEIQQEEQRKARTETLVSDVTSSVNSMSLSTPWAGVVSYPDSVKVSSESRGGDNAGTPVNSQISQNLKSKRSPLHDLLAEEVLKKSNEKEVEVPDSTLASHDMAVHSESIDGSNFIEAKDTKRSRKKSGKSKGSGVKAPVPVTSAEVTISSSPIEKGKSSRSALQEKELPSIPAGPSLGDFVLWKGEREQPNASPSPAWSTDSGRVPKPTSLRDILKEQEKKVSSAVPASPVPTPQKSQPAQANWSSTSSRSISASSPSKAASPLPINSHASNQSKYKGDDDLFWGPIEPSKQETKQSDFPQLASQGSWGSKNVPVKGNSSGLLARQKSASGKPTDRPLSSSPASSQSALKLKNDAMTKHSEAMGFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAETLLKENLGSFDPDHQFIDKFLNYKEMLPSDVLDIAFQSKHGKKVNGLGAAAIASANADIQDVDHTEGSSKGGGKKKGKKGKKVSPLVLGFNVVSNRIMMGEIQTVED* 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3763 1735 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1735 - -
Tpr1g3763 1735 SMART gyf_5 513 568 IPR003169 GO:0005515
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1071 1167 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1273 1301 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1143 1161 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 418 433 - -
Tpr1g3763 1735 ProSiteProfiles GYF domain profile. 512 563 IPR003169 GO:0005515
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 70 140 - -
Tpr1g3763 1735 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1735 - -
Tpr1g3763 1735 SUPERFAMILY GYF domain 505 569 IPR035445 -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1423 1437 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 369 465 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 151 225 - -
Tpr1g3763 1735 Pfam GYF domain 517 559 IPR003169 GO:0005515
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1 35 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 236 259 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1120 1142 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1 266 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1303 1326 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1374 1389 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1459 1504 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1521 1580 - -
Tpr1g3763 1735 Coils Coil 871 891 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 439 462 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 1273 1580 - -
Tpr1g3763 1735 MobiDBLite consensus disorder prediction 52 69 - -
Tpr1g3763 1735 CDD GYF 512 569 IPR003169 GO:0005515
Tpr1g3763 1735 Gene3D - 500 579 IPR035445 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3763 Tpr-Chr1 41709744 41719398 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3763 1 41709744 41719398 Tpr1g3763 1 41709744 41719398 ECH
Tpr1g3763 1 41709744 41719398 Tpr7g0313 7 2533602 2542213 PCT