Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3754 ATGAAATTAAAGTCTAAGAAAGGATGGAAATCTATTGTACCTCTTCATTTAAAAGGAAAATCATCTGTGATTCGTTTTTCTTTATTTCGCAAAGTCAATTCAGCTAGCCATGGACCTGGAAAAACTCCAGTTTATCTCAATGTGTATGACCTGACACCCATGAATGGCTATGTGTATTGGGCCGGTTTTGGTATCTATCACTCTGGTGTCGAAGTTCATGGTGTAGAATATGCATTTGGGGCTCATGACTACCCAACAAGCGGTGTTTTTGAGGTTGAACCTCGGCAATGCCCAGGCTTCAAGTTCAGGAAGTCAATATTCATCGGAACTACATCTTTGGATCCTGTTCAGGTCAGGGAGTTCATGGAATGCGAGTGTGCAAACTACAATGGCGACACATATCACTTAATTGCTAAGAACTGCAATCACTTCTGCAAAGACATATGCTACAAGCTGACGGGGAAATCGATTCCAACTTGGGTTAATCGGCTTGCCAAGCTAGGTTCAATTTGCAACTGCATTCTACCTGAGGCATTAAGAATTTCTGCTGTGAGGCATGATCCAAATTATGAAGCTAATGATAGTGAAAAGAAAAGGCTAAGAAGTGCTTTCAATTCATTGTCTTCAATTTCAATGCGTCAAAAGCAGCTATCAAAATCTTCGCTGTTTCTACAATCACCCTTAAGAGGTTGCTTGTCATCAAAATGGCCGTCATGGGAATTGAGCAAGTCTATTAATCGTTCCTTCAAAGAGAGGTAA 759 0.4058 MKLKSKKGWKSIVPLHLKGKSSVIRFSLFRKVNSASHGPGKTPVYLNVYDLTPMNGYVYWAGFGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTSLDPVQVREFMECECANYNGDTYHLIAKNCNHFCKDICYKLTGKSIPTWVNRLAKLGSICNCILPEALRISAVRHDPNYEANDSEKKRLRSAFNSLSSISMRQKQLSKSSLFLQSPLRGCLSSKWPSWELSKSINRSFKER* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3754 252 Gene3D PPPDE domains 38 192 IPR042266 -
Tpr1g3754 252 PANTHER DESI-LIKE PROTEIN 2 252 - -
Tpr1g3754 252 ProSiteProfiles PPPDE domain profile. 42 179 IPR008580 GO:0008233
Tpr1g3754 252 SMART DUF862_2a 42 180 IPR008580 GO:0008233
Tpr1g3754 252 PANTHER DESUMOYLATING ISOPEPTIDASE 2 252 IPR008580 GO:0008233
Tpr1g3754 252 Pfam PPPDE putative peptidase domain 43 177 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3754 Tpr-Chr1 41631034 41634891 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3754 1 41631034 41634891 Tpr1g3754 1 41631034 41634891 ECH