Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3749 ATGGATTCCAACGGAGAAACTTCGGCAATGAAGATTCGGAGGAAGTCGTCGTTGAGGGAGAAAGAGAACAAAAAAATGAGAGAAAGAAGAAGAAGATCCATAACAGCAAAGATATTCAGTGGACTTCGATCTCAAGGGAACTACAATTTGTCGAAGCATTCTGACAACAACGAGGTCCTCAAAGCTCTATGTGAAGAAGCTGGTTGGTTCGTCGAAGAAGACGGAACCACCTCTCGCAAGGATTACAAGTCTCCAGTTAACAACCATGCAGGCACCTCAACCAGAACCACCCCTTTCTCTTATTACCAAAATCCAAGTCCTGTTATTTCACCCTTTCCAACTCCTATTCCTTCATACCAATTCACTCCTATGTCTTATCCTCCATTGTGGACATCAAACAGTGTAACACCTCCTCTCCACTCACCAACATCATCAACAAACATCAAACCAATTCCTACATGGGATTCTACTTCCAAAGAATCTATGGCTTTTTTCAATTACCCTTTTGTTGCATCTTCTACCCTTGCTAGTCCCATTTCTGATCAGTCGATTAAGTTCCAACCTTTTGGCCAATCTCCATTTGCTGTGCCAAATTCTTCATCTTTCAATGTTGCGGCCGATAACTCAATTAGAGAGATGGGAAGTTCAAAACTGCTTGGGATGCAAGTAAAGCCTTGGGTTGGGCAGAAAGTTCACGATGAAGGAGTGGATGATTTGGTGGAACTCACCCTTGGAACTGGGACATCAAGGAGTTAG 756 0.4312 MDSNGETSAMKIRRKSSLREKENKKMRERRRRSITAKIFSGLRSQGNYNLSKHSDNNEVLKALCEEAGWFVEEDGTTSRKDYKSPVNNHAGTSTRTTPFSYYQNPSPVISPFPTPIPSYQFTPMSYPPLWTSNSVTPPLHSPTSSTNIKPIPTWDSTSKESMAFFNYPFVASSTLASPISDQSIKFQPFGQSPFAVPNSSSFNVAADNSIREMGSSKLLGMQVKPWVGQKVHDEGVDDLVELTLGTGTSRS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3749 251 MobiDBLite consensus disorder prediction 81 99 - -
Tpr1g3749 251 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 145 IPR008540 -
Tpr1g3749 251 MobiDBLite consensus disorder prediction 7 32 - -
Tpr1g3749 251 MobiDBLite consensus disorder prediction 1 32 - -
Tpr1g3749 251 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 180 250 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tpr1g3749 251 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 125 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tpr1g3749 251 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 122 182 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tpr1g3749 251 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 122 182 - -
Tpr1g3749 251 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 125 - -
Tpr1g3749 251 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 180 250 - -
Tpr1g3749 251 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3749 Tpr-Chr1 41584864 41587767 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tpr1g3749 BES1_N 3.5e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3749 1 41584864 41587767 Tpr1g3749 1 41584864 41587767 ECH
Tpr1g3749 1 41584864 41587767 Tpr7g0322 7 2591447 2593642 PCT