Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3745 ATGGACTTGGTTTTTCTTCCCTTTAGTTCATGCATGCCGTTCAGATTTCGGTTTAAGCTTTCACTCGCCATCGTCGTTTTCCAGATTGTATTGATATTGGCATGGTTGGAAGCAAATAATGTAACGGCCCAAGAACAACAATTTCAATGGGGAGGATTGGAAGGGAAGGTTGAGAAAATTGACTCACACTCTTGCATACATGACCATATACTTGAACAGAGAAAGCGACCTGGTCATAAGGTGTATTCAGTTACCCCACAAGTTTACGAGCCTGGTAGATCGAAGCCCCTTCATCGTAAAGGTAGGGCATTACTTGGTATATCAACATCATCAAAGCCCCAAAAGGATGAAAAGCAACCTATTAGGATATATCTAAATTATGATGCTGTTGACCACTCCCCTGACAGGGATTGTAAAAAAGTTGGTGACATTGTTAAGCTTGGGGATCCCCCGATTACTTCTCTTCCTGGTTTGCCGCCTTGTAATCCTCTTTCTAATCATCCAACCCTCGGTGGTTGTTGGTATAACTGCACTTCTGAAGATATATCGAGAGATGATAAAAAGCAGCGTCTTCGTAAGGCGTTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTGCGATTGAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCGGGAATATGTTGAAGAGGGAGTCTCTGATGCTGACTTAGTTCTTTTGGTGACTACAAGACCTACAACTGGGAATACACTTGCTTGGGCAGTGGCATGTGAACGCGATCAATGGGGCCGTGCTATAGCTGGGCATATTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCGGAGACTTTGCTTTCAGCTACTCTGGTACATGAGGTTATGCATGTTCTTGGTTTCGATCCTCATGCCTTTGTTCATTTTAGAGACGAAAGGAAAAGACGTCGTAATAAGGTAACTGAACAAGTTATGGATGAAAAGATTGGGCGAACAGTAACACGTGTGGTGCTTCCACGTGTTGTCATGCATTCGCGACATCATTATGCGGCGTTCTCAGGAAATTTTACTGGTTTGGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCATTGGGAAAAAAGGCTTCTGATGAATGAGATCATGACTGGTTCAGTGGATACAAGATCTGTAGTTTCAAACATGACACTTGCTCTCTTAGAAGATAGCGGGTGGTACAAAGCCAATTATAGCATGGCTGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTACTTCCCCTTGCAATCTCTGGAAGGGAGGCTATCATTGCAACACCACACAGTTTTCAGGTTGTACATATAACAGAGAGGCAGAGGGTTACTGTCCCATTGTAACTTATAGCGGAGACCTTCCTCAGTGGGCTCGGTATTTTCCAAAAGCTAATAAAGGTGGACAATCTGCATTAGCTGATTATTGCGCTTATTTTATTGCATACTCTGATGGATCATGTACAGACACCACCAGTGCACGGGAACCTGATAGAGTGCTAGGTGAAGTCCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTCCAACCAATGGAAATGGTTGTTATCAGCACAGGTGTATCAACAACTCTTTAGAGGTTGCTGTGGATGGTCTGTGGAGAGAGTGTCCTCAGGCTGGCGGGTCCATTCATTTCCCCGGCTTTAATGGTGAATTGATCTGCCCTGCATATCATGAGCTCTGTAACACAGACACGGCGGTTGACTCGGGGAAATGTCCCAGTGCATGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGCCACTGCTTTCTTGGATTTTATGGGCATGATTGCAGTAGACGTTCCTGCCCCAGAAATTGCACTGGTAATGGCTTGTGTCTCAACAATGGAATATGTGAATGTAAACCTGGTTACACTGGCGTTGACTGTTCCACTGCTATCTGTGATGAGCAATGCAGCCTTCATGGTGGGGTCTGTGATAATGGAGTTTGCGAATTCCGCTGTTCTGACTATGGGGCATACAGTTGCCAGAACACCTCCGTGCTCCTCTCGACTCTGTCAGTTTGCAAAAATGTTCTAGGAAGTGATATTTCTGGGCAGCATTGTGCACCCAGAGAACCTAGCATACTGCAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACAACCATTTATTCCCTGTTGGCGCTAGGAAATTATTTAATATATTTGGCAGCACGTACTGTGATGAGGCAGCTAAACGGCTTGCTTGCTGGATCTCAATTCAGAAGTGTGACAAGGATGGAGACAACAGGCTACTAGTATGTCATTCTGCGTGTGAGTCTTACAATCTTGCGTGTGGAGTTTCACTAGACTGCAGTGAGCAAACCCTTTTCAGCAGCAAGGAGGAGGGTGAGGGTAACTGTACTGGTTTTGGTGAGATGAAATTGTCATGGTTTAATCGATTGAGAAGAAGTTTTTCTTTGCGAAATAGTTCCTGA 2553 0.4528 MDLVFLPFSSCMPFRFRFKLSLAIVVFQIVLILAWLEANNVTAQEQQFQWGGLEGKVEKIDSHSCIHDHILEQRKRPGHKVYSVTPQVYEPGRSKPLHRKGRALLGISTSSKPQKDEKQPIRIYLNYDAVDHSPDRDCKKVGDIVKLGDPPITSLPGLPPCNPLSNHPTLGGCWYNCTSEDISRDDKKQRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHINVAPRHLTAEAETLLSATLVHEVMHVLGFDPHAFVHFRDERKRRRNKVTEQVMDEKIGRTVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSNMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGGYHCNTTQFSGCTYNREAEGYCPIVTYSGDLPQWARYFPKANKGGQSALADYCAYFIAYSDGSCTDTTSAREPDRVLGEVRGSNSRCMASSLVRTGFVRGSPTNGNGCYQHRCINNSLEVAVDGLWRECPQAGGSIHFPGFNGELICPAYHELCNTDTAVDSGKCPSACNFNGDCVDGRCHCFLGFYGHDCSRRSCPRNCTGNGLCLNNGICECKPGYTGVDCSTAICDEQCSLHGGVCDNGVCEFRCSDYGAYSCQNTSVLLSTLSVCKNVLGSDISGQHCAPREPSILQQLEEVVVMPNYNHLFPVGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLLVCHSACESYNLACGVSLDCSEQTLFSSKEEGEGNCTGFGEMKLSWFNRLRRSFSLRNSS* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3745 850 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 601 - -
Tpr1g3745 850 Gene3D Leishmanolysin domain 3 444 501 - -
Tpr1g3745 850 Gene3D Laminin 608 637 - -
Tpr1g3745 850 Gene3D Laminin 639 670 - -
Tpr1g3745 850 ProSitePatterns EGF-like domain signature 1. 656 667 IPR000742 -
Tpr1g3745 850 Pfam EGF-like domain 640 667 IPR013111 -
Tpr1g3745 850 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 9 830 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Tpr1g3745 850 Gene3D Leishmanolysin domain 4 503 598 - -
Tpr1g3745 850 ProSitePatterns EGF-like domain signature 2. 656 667 IPR000742 -
Tpr1g3745 850 Gene3D Leishmanolysin , domain 2 314 439 - -
Tpr1g3745 850 Gene3D - 114 304 - -
Tpr1g3745 850 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Tpr1g3745 850 PRINTS Leishmanolysin (M8) metalloprotease family signature 402 431 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Tpr1g3745 850 SMART egf_5 608 636 IPR000742 -
Tpr1g3745 850 SMART egf_5 639 668 IPR000742 -
Tpr1g3745 850 Pfam Leishmanolysin 172 600 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Tpr1g3745 850 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 9 830 - -
Tpr1g3745 850 ProSiteProfiles EGF-like domain profile. 636 668 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3745 Tpr-Chr1 41529853 41538043 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3745 1 41529853 41538043 Tpr1g3745 1 41529853 41538043 ECH
Tpr1g3745 1 41529853 41538043 Tpr7g0324 7 2618161 2626264 PCT