Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3743 ATGATTCGCACGAAACCAAACCAAACTCCTGTTACATTCATTCTCACACACACACTCACAATTTCATTACTCTTCAAAAAATACAATATATATATATCTAATAATCTACAACAACATAACCAAAACAGAAGATACAAAGAAAAAACTGATTCTAACCAAGAAGGGAGGTTTTCCAACCGTTCATTGAAGATGGAAGAAGTTTGCACACCTCTCAAATCTGATAGTAGATTAAAGCACCGTCCTTTGACTCCTCTTAGGCTTTTAAGGGGTGTGATATGTTTGGTTGTGTTTCTTTCTACAGCTTTCATTTGTATAGTATATCTTTCGCCTCTGGCAGTTGTAGGATTGCGACTGATCAGCATTCGTTATAGTAGGAAAGCAGTATCGTTCTTCTTTGGTCTTTGGCTATCTATGTGGCCCTTTCTATTTGAAAAGATAAACAGAACTAAAGTTGTCTTTTCTGGGGATAGTATTCCGATGAGGGAACGTGTGTTACTTATTGCCAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCTCTTAGAAAGGGAAGACTAGGATCTATAAAATACATCCTTAAGAGCAGCTTAATGAAACTACCGATTTTTGGTTGGGGATTTCACCTTCTGGAATTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCAAATATTGCAAAAAAATCTTTCAACATTTCAGGATCCGAAAGATCCTTTGTGGCTATCTCTTTTTCCTGAAGGAACCGATTATACTGAACAGAAGTGTAAAAGTAGTAAAAAATTTGCTGCTGAAGCTGGGCTTCCTGTGCTGTCAAATGTATTACTTCCAAAAACGAAGGGATTTCACACTTGCTTGGAAACTCTACGAGACTCATTGGATGCAGTATATGACGTGACAATTGCATACAAGAATCAATGTCCTTCATTTCTGGACAATGTTTTTGGTCTCGATCCTTCAGAAGTGCACCTGCATATTCGGCGTATTCCTATAGAGGAGATTCCAATTTCTGAAACTAAAGCTGCTTCTTGGTTAATGGATGCATTCCAAATCAAGGACCAATTGCTTTCTGATTTCAATGTTCAAGGCCATTTCCCTAACCAACTAAATGAAGAGAAAATCTCAACCTTCAAGTGCCTACTCACTTTGATCGTGATAATTTCGTTTACTGCCTTGTTTACTTATTTTACCTTGTTTTCTCACATCGGGTTCAAGTTGTATGTAGGTCTATCTTGTGCATATCTTTCTATTGCAACACGCTTCAAAATTCAATTGAAGCCTTTAGCAAATTATGTCCATGCATTCTATAACAGCAAGAAACAAAAGAATGCATAG 1344 0.3757 MIRTKPNQTPVTFILTHTLTISLLFKKYNIYISNNLQQHNQNRRYKEKTDSNQEGRFSNRSLKMEEVCTPLKSDSRLKHRPLTPLRLLRGVICLVVFLSTAFICIVYLSPLAVVGLRLISIRYSRKAVSFFFGLWLSMWPFLFEKINRTKVVFSGDSIPMRERVLLIANHRTEVDWMYLWDLALRKGRLGSIKYILKSSLMKLPIFGWGFHLLEFIAVERKWEIDEQILQKNLSTFQDPKDPLWLSLFPEGTDYTEQKCKSSKKFAAEAGLPVLSNVLLPKTKGFHTCLETLRDSLDAVYDVTIAYKNQCPSFLDNVFGLDPSEVHLHIRRIPIEEIPISETKAASWLMDAFQIKDQLLSDFNVQGHFPNQLNEEKISTFKCLLTLIVIISFTALFTYFTLFSHIGFKLYVGLSCAYLSIATRFKIQLKPLANYVHAFYNSKKQKNA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3743 447 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 71 443 - -
Tpr1g3743 447 SMART plsc_2 164 286 IPR002123 GO:0016746
Tpr1g3743 447 Pfam Acyltransferase 154 307 IPR002123 GO:0016746
Tpr1g3743 447 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 101 272 - -
Tpr1g3743 447 Pfam Acyltransferase C-terminus 318 386 IPR032098 -
Tpr1g3743 447 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 71 443 - -
Tpr1g3743 447 CDD LPLAT_LCLAT1-like 140 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3743 Tpr-Chr1 41522254 41526625 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3743 1 41522254 41526625 Tpr2g0839 2 10292422 10297119 ECH
Tpr1g3743 1 41522254 41526625 Tpr1g3743 1 41522254 41526625 ECH