Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3739 ATGAAGTTCAAAATACCAAAATCAAAACTTTTATTTTTCATTTTTCTCACCCTATTGTGTCTTCCATTTCTCAATGCCTCAAAAACTAGAAAAACAATCATGAAAGATCAATTCAAAGAAGCTCCTCAATTCTACAATTCACCATATTGTGCCTCCATCACTGAAGCAGAATCAGACACCGAACAAGACACAGACACTGATACATACTACATCTGCTCTGAGGAAGCAGTACATGTGGCAATGACATTAGACACAACATACATCAGAGGATCCATGGCTGCAATCCTCTCTGTCCTCCAACACACATCATGCCCAGAAAACATCATCTTTCACTTTGTTTGTTCTTCAAACATTTCACTTCTCAGCTCCACAATCTCAAAATCTTTCCCTTACCTTAAATTCCAAGTCTACAATTTCGATGAATCGATCGTTTCAGGACTAATCTCATCCTCGATTCGATCAGCACTTGATTGTCCTTTAAACTATGCAAGAAGCTACTTGGCAAATCTACTTCCATTATGTGTTAGAAAAATTGTTTACTTAGATTCAGACCTTATCTTAGTTGATGATATCATAAAACTTGCATCAACACCATTAACCGAAAAAAATGCAGTTTTAGCAGCACCAGAATATTGCAATGCAAATTTCACATATTACTTCACACCAACATTTTGGTCCAACCCATCTTTGTCTTTAACATTCGCGAATCGAAAAGCTTGTTACTTTAATACCGGAGTTATGGTAATCGATCTAGAAAAATGGCGCGAAGGCGATTACACAACAAAGATTGAAGAATGGATGGAATTACAAAAGAGGATTAGAATCTATGAACTTGGTTCATTGCCACCTTTTTTACTTGTTTTTGCAGGTGAAATTGTTCCTGTGGATCATAGATGGAATCAACATGGTCTTGGTGGCGATAATTTTCGAGGTCTATGTAGAGAACTTCATCCTGGTCCAGTGAGTTTATTGCATTGGAGTGGAAAAGGTAAACCATGGGTGAGATTGGATGCTAATAGACCTTGTCCTTTGGATACTCTTTGGGAACCTTATGATCTTTTGAAGACACCATTTTCTCTTGAATCTTGA 1089 0.3719 MKFKIPKSKLLFFIFLTLLCLPFLNASKTRKTIMKDQFKEAPQFYNSPYCASITEAESDTEQDTDTDTYYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHTSCPENIIFHFVCSSNISLLSSTISKSFPYLKFQVYNFDESIVSGLISSSIRSALDCPLNYARSYLANLLPLCVRKIVYLDSDLILVDDIIKLASTPLTEKNAVLAAPEYCNANFTYYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWREGDYTTKIEEWMELQKRIRIYELGSLPPFLLVFAGEIVPVDHRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWVRLDANRPCPLDTLWEPYDLLKTPFSLES* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3739 362 SUPERFAMILY Nucleotide-diphospho-sugar transferases 77 353 IPR029044 -
Tpr1g3739 362 Pfam Glycosyl transferase family 8 78 335 IPR002495 GO:0016757
Tpr1g3739 362 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 11 362 - -
Tpr1g3739 362 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 362 - -
Tpr1g3739 362 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3739 Tpr-Chr1 41495543 41497177 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3739 1 41495543 41497177 Tpr1g3739 1 41495543 41497177 ECH
Tpr1g3739 1 41495543 41497177 Tpr7g0326 7 2641560 2643219 PCT