Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3734 ATGGCCACTGACACTCCTCTATTAGACAACACTAACAACAACTCTTCTAGTGTTGTTGAAAATGAAGAAGAGAAGCCACTGAAAATTGTTCACAAATTTGGTGTTGAGTCAAAGAAGATATGGAAAATAGCAGGTCCAGCAATCTTAACTGCTTTATCTCAATTCTCACTTGGTGCACTTACTTCTACATTTCTTGGTCATGTCGGTGAGCTTCAACTTGCTGCTTTTTCTGTTGAAAACTCTGTTATTGCTGGGTTTGCCTTTGGTTTCTTGTTGGGTATGGGAAGTGCCTTGGAGACACTATGTGGGCAAGCATTTGGTGCTGGTCATATAAGGATGATGGGAGTTTACATGCAAAGATCATGGATTATCTTGTTGACTGCTGCCCTTTTAATGTCACCTTTTTATATTTGGGCAACTCCCCTCTTGAAGCTCGTTGGACAGACCGATGAGGTCGCAGAGGCTGCTGGCACATTGGCTCGATGGATGATACCACAATTATTTGCATATGCTTTGAATTTTCCAATTCAAAAGTTCTTACAAGCACAAAGGAAAGTCCTTGTGATGTTATGGATATCAGCATCAGCTTTGGTTTTCCATGTAATTATTAGTTGGCTTCTAATATTTAAACTTGGATGGGGCTTAGCTGGAGCTGCAATTTCTCTTAACACATCATGGTGGCTTATTATCATTGCTCAACTTATGTACATTTTCATCACTAAATCAGATGGTGCTTGGAATGGATTCTCAATGCTAGCATTTGCTGATTTGTTTAATTTTGTCAAACTTTCTTTAGCATCAGCTGTTATGTTGTGCTTGGAGTTTTGGTACTTGATGATATTGGTGGTGATAACAGGACATTTAAAAAACCCTCTAGTACCTTTGGATTCCATATCTATTTGTATGACCATAAATGGTTGGGATATCATGATTGCTCTAGGGTTTAATGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGAGCAGGTGATTTTAAGGCTGCAAAATTCTCAGTGATAGTGGTTTCCTTGACATCAATATTCATAGGTGTTGTTGCCATGATCATAGTACTATCAACAAGAGATTTCTTTCCTCAATTGTTTACCTCAAGTGATGCTGTTGCCGAGGAAACAACTAAACTTGCTGTCTTGCTTGGTTTCACTGTTCTTCTAAACAGCCTTCAACCAGTCTTGTCTGGTGTTGCTGTTGGAGCTGGTTGGCAATCTCTTGTAGCATACATCAATCTTGGATGCTATTATATTGTTGGAGTACCAGCAGGGATATTGTTGGGTATCACATTTGGTTTTGGAGCAGAGGGTATTTGGTCGGGTCTAATTGGAGGCATAGCAATGCAGACTATAATCCTTATAATTGTCACTTCAGTCACCAATTGGAAAAAAGAGGCTGATGAAGCAGAAAGCCGTGTGAAGAAGTGGGGAGGAGCAAATGCATATGAAAATTGA 1464 0.3955 MATDTPLLDNTNNNSSSVVENEEEKPLKIVHKFGVESKKIWKIAGPAILTALSQFSLGALTSTFLGHVGELQLAAFSVENSVIAGFAFGFLLGMGSALETLCGQAFGAGHIRMMGVYMQRSWIILLTAALLMSPFYIWATPLLKLVGQTDEVAEAAGTLARWMIPQLFAYALNFPIQKFLQAQRKVLVMLWISASALVFHVIISWLLIFKLGWGLAGAAISLNTSWWLIIIAQLMYIFITKSDGAWNGFSMLAFADLFNFVKLSLASAVMLCLEFWYLMILVVITGHLKNPLVPLDSISICMTINGWDIMIALGFNAAISVRVSNELGAGDFKAAKFSVIVVSLTSIFIGVVAMIIVLSTRDFFPQLFTSSDAVAEETTKLAVLLGFTVLLNSLQPVLSGVAVGAGWQSLVAYINLGCYYIVGVPAGILLGITFGFGAEGIWSGLIGGIAMQTIILIIVTSVTNWKKEADEAESRVKKWGGANAYEN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3734 487 PANTHER PROTEIN DETOXIFICATION 33 21 473 - -
Tpr1g3734 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 473 - -
Tpr1g3734 487 TIGRFAM matE: MATE efflux family protein 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g3734 487 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g3734 487 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g3734 487 Pfam MatE 267 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g3734 487 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g3734 487 CDD MATE_eukaryotic 36 469 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3734 Tpr-Chr1 41454538 41459566 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3734 1 41454538 41459566 Tpr1g3734 1 41454538 41459566 ECH