Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3733 ATGGCAGTTTCCTTATCATCTCTCACATCTTCCCTCTCTTCACTCTCCTTCTCTTCCAACATCTCTCACATACCAACCTCCCTTTCTCTCCCCAGAATAACAACCCTCTCCCGCTCTCCCAAATTCCCTTCATTCACTGTAACCGCTTCAACAGCAGACATTGCTCTTGAGCCCGAACCCGAAATTGCTGACCTCAAGAAATACGTCAAATCCAGACTTCCTGGTGGTTTCGCCGCTCAAACTATCCTCGCTACCGGTCGCCGGAAAACTGCTGTTGCTCGTGTTGTTCTTCAGGAAGGAACTGGCAAAATCATTATTAATTACCGTGATGCTAAGGAATATCTTCAAGGAAATCCGCTATGGCTTCAATACGTTAAGATTCCCTTAATAACTTTGGGATATGACACTAGTTATGATGTGTTTGTCAAAGCCGAGGGAGGCGGCCTCTCTGGTCAAGCTCAGGCGATCACCCTTGGCATTGCTCGTGCATTGCTAAAGGTGAGTGAAAGTCATAGAGTACCTCTGAGACTGCAAGGGCTTCTGACCAGAGATTCTAGAGCTGTTGAGAGGAAGAAAGTTGGTCTCCATAAAGCTCGTAAAGCTCCTCAATACTCCAAACGTTGA 624 0.4663 MAVSLSSLTSSLSSLSFSSNISHIPTSLSLPRITTLSRSPKFPSFTVTASTADIALEPEPEIADLKKYVKSRLPGGFAAQTILATGRRKTAVARVVLQEGTGKIIINYRDAKEYLQGNPLWLQYVKIPLITLGYDTSYDVFVKAEGGGLSGQAQAITLGIARALLKVSESHRVPLRLQGLLTRDSRAVERKKVGLHKARKAPQYSKR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3733 207 Hamap 30S ribosomal protein S9 [rpsI]. 77 207 IPR023035 -
Tpr1g3733 207 PANTHER RIBOSOMAL PROTEIN S9 63 207 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tpr1g3733 207 SUPERFAMILY Ribosomal protein S5 domain 2-like 81 207 IPR020568 -
Tpr1g3733 207 Pfam Ribosomal protein S9/S16 86 207 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tpr1g3733 207 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 63 207 - -
Tpr1g3733 207 ProSitePatterns Ribosomal protein S9 signature. 146 164 IPR020574 GO:0003735|GO:0005840|GO:0006412
Tpr1g3733 207 Gene3D - 73 207 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3733 Tpr-Chr1 41451220 41453377 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3733 1 41451220 41453377 Tpr1g3733 1 41451220 41453377 ECH