Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3725 ATGCTAAGAGGTGAAATCGTTGGTTCCAAAAGCGCTAGGCACAGCTCCACCGCCACTGTATCTTCGAATAAAGTTCTTGTGGCGGTTAAAGCGGAGAAAGTGATCTCTAACACCGCATTAGCATGGGCGCTTACTCATATAGTTCATTCTAGCGACTCAATCACACTTCTCGCCGTTTATTCTACCGAAAAAACCGGAAGAAGGTTCTGGAATTTTTCAAGACTGGTGGCCGGAGATTGTTCGAATGGACACGCGGGAAAGTCGCCGGAGGAAATTTCTGATATCTCTGAGTCTTGTGCTCAGATGGTTTTTCAGTTGCACAATCACATTGAGGTTAGAGTGAAGATTAAGGTAGTCACGGGAACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGTGGTTCACATTGGGTCATACTGGACAAGAAACTAAAGCAAGAGATAAAACATTGCATGGATGAACTCAGCTGTAGCATTGTGGTTATGAATGGCTCACAGCCCAAAGTCCTCCGACTTAATTTAGGAGGACACTCCGATGAACTTCAAACTCCATTTTTCTCTTCATCCTCTTCGCCAGGTATAGAAATTGGAAAGCTAAAAGGCCGCAGATTGAAGCATTCCACCCCAGTTGGTAGCCCTGAAGTAACAGGTTCTTCTGTTACAAGAAGTATCGGAATAGATTCAGTGTCAAGTTCAGACTCAATGACCTCTCCTTTCCTAGTCTATAAAGAGAACCCTCTGTATGAGGGTCATGGATCACACAAAACAACAAACAAATCAATCAATAGGCCAAAAGATTTCAACTTCCAGCCACCGTTATACTTTAGTTTGGATAGGGATAGCCCACCCCCTTCAAGGAAACCCCCAACGTCATCTGTGACTAGTGATAAGAACACTGAATTTTGGATCCATCAGAACCACATTAATAATGAGAAGCTTCATAGAGCTGAAAACAGGATTATTCAAAGAACTAAATCTCCAAATTCGAAAACTTTACTTGAGAATTTTCTACACTGTGATCAAGAGAAGAGAACAAGTGAACTTGAGTTTAACAAAACTGAAAATAGAAGTTATGTCACCAGTTCAAGCATCAGAGATAGCCCTATTCCTTTGGGTAGAAATTCCTCTATACCTCCTCCCTTGTGCTCACAGTGTCAGAACATAGCACCTGTATTTGGAAATCCTCCCAGACGTTTTTCTTACAGAGAGATAGAAGATGCTACTGACATGTTCTCAGACTTGAATTTTTTGGCGGAAGGTGGATTTGGTGTGGTTCACAGAGGAATACTCAAAGATGGCCAGGTTGTTGCAGTGAAACAATTAAAACTTAGTGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGGTATTGAGTTGTGCACAACACAGAAATATTGTGTTGCTGATAGGATTCTGCACAGAGGACAATGTGAGGATATTAGTCTATGAGTACGTATGTAATGGATCCTTGGACCTCTGCTTACATGGCAAAGAGGGTATACCTTTGGATTGGAACTCGCGGTTAAAGATAGCGATTGGAGTTGCCCGAGGCTTGCGCTATCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACATTCGTCCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATAAATACTGAAGATCGCGTTATGGGAACTTCAGGGTACATTGCACCAGAGTATCTTGATTCTGGAATTCTTACGTATAAAGTAGATGTATATGCATTTGGAATTGTTTTATTGGAGCTAATAACAGGTCGAAGAAATAATGAGTTGGAACAGCTCAACGGACATTCATACCTTTCTGAATGGTTTCACCCCCTACACATGTTAGACCCTAATAATATCTTACAAAACGTTGGATCTCTCAACCCATGCTTGGATTCTGAGGGGTCACTAGAATCTAATCTTCAATTGCAAGCCATGGCACAAGCTGCTTCATTGTGTTTACGTTTGGATCCTGATCATAGGCCTCCAATTTCAAAGATCCTCAGAGTGCTGGAAGGGGGAAATCCGGTTCGTTCGTTGGGTTTAGACATCAATTCAGTTGGTAACACAAGTGGTCGCTTAAGTGGTTTGAGTTCGTATACTCCTCCTAAAGGTACAATAAGCCATTCTCGCATGTTATCACATTGA 2205 0.4236 MLRGEIVGSKSARHSSTATVSSNKVLVAVKAEKVISNTALAWALTHIVHSSDSITLLAVYSTEKTGRRFWNFSRLVAGDCSNGHAGKSPEEISDISESCAQMVFQLHNHIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEIKHCMDELSCSIVVMNGSQPKVLRLNLGGHSDELQTPFFSSSSSPGIEIGKLKGRRLKHSTPVGSPEVTGSSVTRSIGIDSVSSSDSMTSPFLVYKENPLYEGHGSHKTTNKSINRPKDFNFQPPLYFSLDRDSPPPSRKPPTSSVTSDKNTEFWIHQNHINNEKLHRAENRIIQRTKSPNSKTLLENFLHCDQEKRTSELEFNKTENRSYVTSSSIRDSPIPLGRNSSIPPPLCSQCQNIAPVFGNPPRRFSYREIEDATDMFSDLNFLAEGGFGVVHRGILKDGQVVAVKQLKLSGSQADLDFCREVRVLSCAQHRNIVLLIGFCTEDNVRILVYEYVCNGSLDLCLHGKEGIPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDSGILTYKVDVYAFGIVLLELITGRRNNELEQLNGHSYLSEWFHPLHMLDPNNILQNVGSLNPCLDSEGSLESNLQLQAMAQAASLCLRLDPDHRPPISKILRVLEGGNPVRSLGLDINSVGNTSGRLSGLSSYTPPKGTISHSRMLSH* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3725 734 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 723 - -
Tpr1g3725 734 SUPERFAMILY Protein kinase-like (PK-like) 390 691 IPR011009 -
Tpr1g3725 734 SMART tyrkin_6 412 690 IPR020635 GO:0004713|GO:0006468
Tpr1g3725 734 Gene3D Transferase(Phosphotransferase) domain 1 488 697 - -
Tpr1g3725 734 PANTHER OS01G0253100 PROTEIN 19 723 IPR045271 GO:0004714|GO:0006468
Tpr1g3725 734 ProSiteProfiles Protein kinase domain profile. 412 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3725 734 Pfam Protein tyrosine and serine/threonine kinase 418 688 IPR001245 GO:0004672|GO:0006468
Tpr1g3725 734 MobiDBLite consensus disorder prediction 714 734 - -
Tpr1g3725 734 MobiDBLite consensus disorder prediction 276 299 - -
Tpr1g3725 734 Gene3D Phosphorylase Kinase; domain 1 386 487 - -
Tpr1g3725 734 Gene3D HUPs 8 182 IPR014729 -
Tpr1g3725 734 ProSitePatterns Tyrosine protein kinases specific active-site signature. 533 545 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3725 Tpr-Chr1 41375884 41381649 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr1g3725 PK_Tyr_Ser-Thr 2.3e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3725 1 41375884 41381649 Tpr1g3725 1 41375884 41381649 ECH