Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3716 ATGGGTGAAACTGATAACCACCAAGCACCACCGTCAGCTCAGGCACCGCCACCACAAAATCTGGGACTTTCAAGGGGACCCACTTGGGTTCCAGCTGAACAACTTCTTCAACTTCATTATTGCATCCATTCAAATCCTTCATGGCCGGAAGCATTGCTTTTGGCTTTTCAGCACTACATTGTGATGCTTGGAACAACAGTTCTGATTGCAAGTAATCTTGTACCTTTAATGGGTGGGAATCATGGTGATAAGGCTCGTGTGATTCAGTCATTGTTGTTTATGTCTGGTGTCAACACATTGCTTCAGACTTGGTTTGGTTCGAGGCTTCCTGTCATTATGGGTGGATCACTTGCTTTTCTTCTTCCGGTGATGTCGATCATAAATGATTACAATGATCATACTTTTCCATCTGAGCATGAGAGGTTTACCTACACAATGAGAACAATTCAAGGATCTCTCATTGTTTCATCTTTCGTCAATATCTTCCTTGGATATAGTAGGACATGGGGAAATTTAGCAAGGCTGTTTAGTCCCATTGTCATTGTACCTGTGGTATGTGTGGTCGGTCTTGGTCTCTTCGCGAGGGGCTTTCCATTGCTTGCAGATTGTGTGCAAATTGGGCTACCTATGCTCATTCTAGTGATCATAACACAGCAGTATTTGAAGCGCCTTCATGCTAAGGCTGATCATATACTTGAGAGGTTTGCTTTACTTGTCTGCATTGCCGTTGTTTGGGCTTTTGCTGCTATCCTTACCGTGGCTGGTGCGTACAACACTTCCAAATCAAAGACTCAAACAAGTTGTCGCACAGATCGCTCGTACCTTATGTCTTCTGCTCCTTGGATTAAAGTGCCATTACCATTTCAGTGGGGTACTCCCATATTCAAAGCTAGTCATGTCTTTGGGATGATGGGGGCAGCACTTGTCTCTTCTGCTGAGTCAACTGGTACTTACTTTGCCGCAGCCAGGCTTTCTGGTGCAACACCGCCTCCTCCACATGTGCTCAGCCGAAGCATCGGGCTCCAGGGCATTAGTATGCTGCTTGAAGGCATTTTTAGTTGCTGTGTTGGCACTACAGCATCTGTTGAAAATGTCGGTCTACTCGGTCTCACTCATATAGGGAGCAGAAGAGTGGTGCAAATGTCATGCGGTTTCATGATTTTCTTCTCCATTTTTGGAAAATTCGGAGCCTTTTTCGCATCAATTCCCTTACCAATATTTGCTGCTATATACTGTGTTTTATTCGGCATTGTCGCTGCTACTGGGATTTCCTTTATACAATTTGCGAATAACAACTCCATAAGAAACATCTATGTTTTCGGCTTAACCTTGTTTCTCGGGATCTCAATTCCTCAATATTTTATCATGAACACTGCACCAAATGGTCATGGTCCTGTTAGAACAAACGGTGGATGGTTTAATGATATATTGAACACCATATTCTCATCTCCACCAACTGTGGCAATAATAGTTGGGACAGTACTTGACAACACACTTGAAGCCAAGAAAACAGCTGTGGACAGAGGACTTCCATGGTGGGTTCCTTTCCAGAATAAGAAGGGAGATGTTCGAAATGATGAATTTTACCGCTTTCCTCTCGGGTTAACTGAATATATTCCTACCAGATTTCTCTAG 1635 0.4361 MGETDNHQAPPSAQAPPPQNLGLSRGPTWVPAEQLLQLHYCIHSNPSWPEALLLAFQHYIVMLGTTVLIASNLVPLMGGNHGDKARVIQSLLFMSGVNTLLQTWFGSRLPVIMGGSLAFLLPVMSIINDYNDHTFPSEHERFTYTMRTIQGSLIVSSFVNIFLGYSRTWGNLARLFSPIVIVPVVCVVGLGLFARGFPLLADCVQIGLPMLILVIITQQYLKRLHAKADHILERFALLVCIAVVWAFAAILTVAGAYNTSKSKTQTSCRTDRSYLMSSAPWIKVPLPFQWGTPIFKASHVFGMMGAALVSSAESTGTYFAAARLSGATPPPPHVLSRSIGLQGISMLLEGIFSCCVGTTASVENVGLLGLTHIGSRRVVQMSCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFIQFANNNSIRNIYVFGLTLFLGISIPQYFIMNTAPNGHGPVRTNGGWFNDILNTIFSSPPTVAIIVGTVLDNTLEAKKTAVDRGLPWWVPFQNKKGDVRNDEFYRFPLGLTEYIPTRFL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3716 544 MobiDBLite consensus disorder prediction 1 24 - -
Tpr1g3716 544 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 542 - -
Tpr1g3716 544 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 1 542 IPR029943 -
Tpr1g3716 544 Pfam Permease family 51 454 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3716 Tpr-Chr1 41259988 41264863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3716 31 540 Organic Solute Cotransporters AT2G34190 58.039 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3716 1 41259988 41264863 Tpr1g3716 1 41259988 41264863 ECH