Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3715 ATGACAGTCCTAACTGACGTAACTGGCGTACTTTCCAATGACATCGTTTCCGATCTATGGAAAAATCTCGCAACCATTTCACACAAAACACTCAATTCCAAAGCAACCGCAGAACATCTCTTAACTTTCATTCGAGAGATTCTTCCATCAATCGAACGGATAAAATACTCCGGCGTCGAACTTCCACAGCCGAGACAATCTCATCTCGACCGTTTATCCGAGATTCTCCGTTCCGGTGTTGAGCTTTCACATCAAGCTTTAGCTACAAGTCGTTGGAATGTTTACAGAAACTTTCAGCTTGCGAAAAAGATGGAGAATCTTGAAGAAACGGTTACCAAATACTTGCAGGGTCCGTTACAGGCTGAGATACTTGCTGATGTTAGTCAGGTAAGGGTTGATATGGCGGAACGGTTCGATAGGATTGAGGCGTCGAACCGGAGGATGGAGCGGTTTTTTGAGGATATGAAGATTGGAGTTGGTGTTGGTGGTAGTGGTAGTGGTAGTGGTTGGATTGAGGAAGTTGTTAGGAGTAGTGAAGAAGATGAGGGTAGTTTTGGGAATTTTAGTTTGAGTTTTGGGTTGGAGTTTGGAAAGAATAAGGTTGTGGAAATGGTTGTTGGAAGAAAAGATTTCTGTGTTATTGGGATTTGTGGGATTGGTGGATCTGGGAAAACTACTCTTGCTAGAGAGATTTGCAGAGATGAACAAGTGAGATGTTATTTTAAGGAAAGAATTTTGTTTCTGACGGTCTCGCAGTCACCGAATGTGGAGCAGCTGAGGGGAAAGATTTGGGGGCACATCATGGGAAGTGGAAGCATGAATACCAATTATGTTGTTCCGCAGTGGATGCCCCAATATGAATATGCCGGGAGCCAGGCTCAAATCCTGATTATTCTCGACGATGTGTGGACACTTTCCGTGCTGGAGCAGCTAGTGTTTAGAATACCTGGTGTCAAATTCATTGTGGTTTCCAGGTTCCATTTCTCAGTTTTCAATGCAACTTATCAAGTGGAACCGCTCGGCGAAGACGATGCCTTGTCTTTGTTCTGTCACCACGCTTTTGGACAGACATCAATCCCTTCCACAGCTAATCAGAATTTAGTCAAACAGGTTGTGGCTGAGTGTGGAAAGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCGTTGCGAGATCAGAACGAGATGTTTTGGTTGAGTGTCAAAACAAGGCTTTCACAAGGGTTAAGCATAGGCGAATCCTATGAACTTAATCTGATTGATCGAATGGCAATCAGTATTAATTACCTGCCAGAAAAGATCAAAGAGTGCTTCTTGGACCTGTGTTCCTTTCAAGAGGATAAAAAGGTTCCTCTAGAAGTTCTAATCAACATGTGGGTTGAAATCCATGATATTCATGAAACAGAAGCATATGCTATTGTCGTTGAGCTTTCGAACAAGAATCTCCTCACCTTAGTGAAAGAGGCACGTGCTGGGGGAATGTATAGCAGTTGCTTTGAGATTTCTATTACTCAACATGATATACTGAGAGATCTTGCCCTTAATTTGAGTAATCGTGGAAGCGTTAATCAACGCCGAAGATTAGTAATGCCAAAACGAGATGATGATGGACAACTTCCTAAAGAATGGTTGAGACATGAGGATCAACCGTTCGAAGCTCAAATTGTTTCAATTCAGACAGGTGAAATGAGAAAAAGTGATTGGTGTAATTTGGAATTTCCTAAAGCTGAAGTGCTGATTATTAATTTCACATCCAGTGAATACTTCTTACCTCCTTTCATTAATAGAATGCCAAATTTGAGAGCATTAATAGTAATAAACCACAGCACTTCGTATGCGCGTCTTCACAATATTTCGGTTTTGAAGAGTTTAACCAAATTAAGGAGCCTTTGGCTTGAAAAAGTTTCAATCCCACAGTTATCTGGCATAGTCATGGAAAGCTTGAGGAAATTGTTTATAGTCCTTTGTATGATTAACAACAGTCTTGAAGGAAAAGATTCAAACCTAGCCGATATCTTCCCGAACATCTCTGAGCTCACACTTGATCACTGTGAAGATCTAACTGAGTTTCCTTCGAGTATTTGTAAGATACAGTCACTAAAAAACTTGAGTCTCACTAACTGTCATAATTTGACACGATTACCAAATGAATTAGGCTCGCTAAACTCTCTAGAGATTCTCCGGTTATATGCGTGTCCGGATTTGAGAACACTTCCTCCTAGCATCTGCCAAATGACTAGATTGAAGTATATCGACATTTCTCAATGTGTTAACCTTACAAGCTTCCCCGAAGCAATCAGTAAGTTGGTAAGCTTGGAGAAGATCGACATGAGGGAATGTCCGATGATTGCAAATATACCTAAGTCTGCATTGTCATTGCATTCTTTGCAGCTTGTAATTTGTGACGAGGAAGTTTCATCGACGTGGAAGGAAATCGGGAAGGCCAAGCCTAATCTCAATGTTCAAGTAGCAGAGATGCAATATGATCTAGATTGGTTAGATACCGACTAA 2508 0.4135 MTVLTDVTGVLSNDIVSDLWKNLATISHKTLNSKATAEHLLTFIREILPSIERIKYSGVELPQPRQSHLDRLSEILRSGVELSHQALATSRWNVYRNFQLAKKMENLEETVTKYLQGPLQAEILADVSQVRVDMAERFDRIEASNRRMERFFEDMKIGVGVGGSGSGSGWIEEVVRSSEEDEGSFGNFSLSFGLEFGKNKVVEMVVGRKDFCVIGICGIGGSGKTTLAREICRDEQVRCYFKERILFLTVSQSPNVEQLRGKIWGHIMGSGSMNTNYVVPQWMPQYEYAGSQAQILIILDDVWTLSVLEQLVFRIPGVKFIVVSRFHFSVFNATYQVEPLGEDDALSLFCHHAFGQTSIPSTANQNLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKTRLSQGLSIGESYELNLIDRMAISINYLPEKIKECFLDLCSFQEDKKVPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISITQHDILRDLALNLSNRGSVNQRRRLVMPKRDDDGQLPKEWLRHEDQPFEAQIVSIQTGEMRKSDWCNLEFPKAEVLIINFTSSEYFLPPFINRMPNLRALIVINHSTSYARLHNISVLKSLTKLRSLWLEKVSIPQLSGIVMESLRKLFIVLCMINNSLEGKDSNLADIFPNISELTLDHCEDLTEFPSSICKIQSLKNLSLTNCHNLTRLPNELGSLNSLEILRLYACPDLRTLPPSICQMTRLKYIDISQCVNLTSFPEAISKLVSLEKIDMRECPMIANIPKSALSLHSLQLVICDEEVSSTWKEIGKAKPNLNVQVAEMQYDLDWLDTD* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3715 835 PRINTS Disease resistance protein signature 213 228 - -
Tpr1g3715 835 PRINTS Disease resistance protein signature 289 303 - -
Tpr1g3715 835 PRINTS Disease resistance protein signature 375 389 - -
Tpr1g3715 835 PRINTS Disease resistance protein signature 694 710 - -
Tpr1g3715 835 Gene3D - 340 417 IPR042197 -
Tpr1g3715 835 Pfam NB-ARC domain 199 421 IPR002182 GO:0043531
Tpr1g3715 835 Gene3D - 192 334 IPR027417 -
Tpr1g3715 835 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 15 137 IPR008808 -
Tpr1g3715 835 Gene3D - 420 511 IPR036388 -
Tpr1g3715 835 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Tpr1g3715 835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 831 IPR044974 GO:0006952
Tpr1g3715 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 440 IPR027417 -
Tpr1g3715 835 SUPERFAMILY RNI-like 573 798 - -
Tpr1g3715 835 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 11 831 - -
Tpr1g3715 835 Gene3D Ribonuclease Inhibitor 551 817 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3715 Tpr-Chr1 41249587 41253619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3715 635 784 WRKY Transcription Factor Family AT4G12020 30.519 2.38e-09 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3715 1 41249587 41253619 Tpr1g3715 1 41249587 41253619 ECH